PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640359.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 328aa MW: 36792.9 Da PI: 9.0846

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.1	1.7e-19	180	234	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q +Le+ F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k XP_021640359.1 180 RKKLRLTKQQSAILEDSFKEHSTLNPKQKQALAEQLNLRPRQVEVWFQNRRARTK 234 78889************************************************98 PP
2	HD-ZIP_I/II	122.1	2.8e-39	180	268	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+k+q+++LE+sF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E d+e+Lk+++++l+een+rL+ke +eL+ + XP_021640359.1 180 RKKLRLTKQQSAILEDSFKEHSTLNPKQKQALAEQLNLRPRQVEVWFQNRRARTKLKQTELDCEVLKKCCETLTEENKRLQKELQELK-S 268 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MLIYLISFIN KQSPPNLFPI LSLTSTFLSR RLYLSPTSIV SRFYDQATST TLSVVFQFNI 60 MGFGISDGVC NTGLGLGLSC HDKQQNCSQS DHLKRKKNKL SLKYDHMFPS LTLGPPQEPY 120 PSANKVEADL QPQPQASSPS AASSSSNSRV KKEREFAGEE VEVERVSSRV SDEDEEGSPR 180 KKLRLTKQQS AILEDSFKEH STLNPKQKQA LAEQLNLRPR QVEVWFQNRR ARTKLKQTEL 240 DCEVLKKCCE TLTEENKRLQ KELQELKSLK LASPLHMELH AATLTMCPSC ERIGSGGDAF 300 STSALAVGPK PHFQSPFTNH QQLARQPV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	229	237	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	7e-56	HD-ZIP family protein