PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640461.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 714aa MW: 78359.5 Da PI: 6.4777

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.6	8.8e-15	283	342	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021640461.1 283 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 342 57*****************666664478446***********************98 PP
2	AP2	46.6	8.2e-15	385	436	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_021640461.1 385 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 436 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
MNNWLGFSLS PQELPSQSNH HQDHSQNTSS LLGFQSDEIS GSDVSGECFD LTSDSSAPSF 60 NLPATFGIFE GFRNNQSQDW NMKALGMNPD AAYKTNSDLA MFMGTSRSSQ NLDQNQEPKL 120 ENFLGDYSFA NHEHKIPAGC NAMYKFQKCS LQQATPNDRI SIGEDNNSIN TGSNSSSIGL 180 SMIKTWLRNQ PAPTQQQEHK NNGGGAQSLS LSVSTGSQSG SPLPLLTANT GESNSNGGDH 240 HSSTSSDNKQ QQQQKTTIGL DSQTAAIEAV PRKSIDTFGQ RTSIYRGVTR HRWTGRYEAH 300 LWDNSCRREG QTRKGRQVYL GGYDKEEKAA RAYDLAALKY WGTTTTTNFP ISNYENELEE 360 MKHMTRQEYI ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ 420 EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV NSILESSTLP IGGAAKRLKD AEQAEMTIDS 480 HTTENDNMSS QLTDGISSYG IAQHPWPTVA FQQSHHQPFS MHYPYGQRLW CKQEQDTEAN 540 NHSFHHHQLQ LGNTHNFFQP SVLHNLMSID SSSMEHSSGS NSVMYSSVVG DGNSGGNGSN 600 QGMGYGSSYA IPMVTTVIGS NDEEQNQGNG FGDGEVKVLG YENILGSSDP YRGRNLYYFS 660 QQSAGGGVVK GISAFDQGSA CNNWVPTAVP TLGPRSSNMA VCHGASTFTV WSDT

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

MNNWLGFSLS PQELPSQSNH HQDHSQNTSS LLGFQSDEIS GSDVSGECFD LTSDSSAPSF  60
NLPATFGIFE GFRNNQSQDW NMKALGMNPD AAYKTNSDLA MFMGTSRSSQ NLDQNQEPKL  120
ENFLGDYSFA NHEHKIPAGC NAMYKFQKCS LQQATPNDRI SIGEDNNSIN TGSNSSSIGL  180
SMIKTWLRNQ PAPTQQQEHK NNGGGAQSLS LSVSTGSQSG SPLPLLTANT GESNSNGGDH  240
HSSTSSDNKQ QQQQKTTIGL DSQTAAIEAV PRKSIDTFGQ RTSIYRGVTR HRWTGRYEAH  300
LWDNSCRREG QTRKGRQVYL GGYDKEEKAA RAYDLAALKY WGTTTTTNFP ISNYENELEE  360
MKHMTRQEYI ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ  420
EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV NSILESSTLP IGGAAKRLKD AEQAEMTIDS  480
HTTENDNMSS QLTDGISSYG IAQHPWPTVA FQQSHHQPFS MHYPYGQRLW CKQEQDTEAN  540
NHSFHHHQLQ LGNTHNFFQP SVLHNLMSID SSSMEHSSGS NSVMYSSVVG DGNSGGNGSN  600
QGMGYGSSYA IPMVTTVIGS NDEEQNQGNG FGDGEVKVLG YENILGSSDP YRGRNLYYFS  660
QQSAGGGVVK GISAFDQGSA CNNWVPTAVP TLGPRSSNMA VCHGASTFTV WSDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-136	AP2 family protein