PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021640514.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 263aa    MW: 29676.6 Da    PI: 5.4137
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021640514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.36.2e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+  ++++G  +W++ ++  g+ R++k+c++rw +yl
   XP_021640514.1 14 KGPWTPEEDKILISHIQKYGHSNWRALPKQAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding551.9e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l
   XP_021640514.1  67 RGNFTEEEEKTIIKLHEMLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MVRAPCCEKM GLKKGPWTPE EDKILISHIQ KYGHSNWRAL PKQAGLLRCG KSCRLRWINY  60
LRPDIKRGNF TEEEEKTIIK LHEMLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKKIKQKQ  120
DSNNQQLYVT VPKCDDLSVS NLSESDNSII PALPGLIASP GHSPMSPQPS SSDLSTVTET  180
SGATAETENI KVEKMDSSDM FFPLIDQDLW SEAELAENSS MELASDSMVA AGFYSNFPRI  240
DDDNDMDFWY NLFVKAGDTQ ELL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.19e-84MYB family protein