PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640745.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 246aa MW: 28597.3 Da PI: 9.2533

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.4e-15	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd++l+ +v+ +G g+W+t++++ g+ R +k+c++rw +yl XP_021640745.1 12 KGLWKPEEDLILKTYVETHGEGNWATVSEKSGLMRGGKSCRLRWKNYL 59 678*******************************************97 PP
2	Myb_DNA-binding	49.5	1e-15	65	122	1	48
TSSS-HHHHHHHHHHHHHTTTT...........-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...........tWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ +W++Ia +++ gRt++++k++w+++l XP_021640745.1 65 RGGMSQEEEDLIIRMHKLLGNRwslayplfltcRWSLIAGRLP-GRTDNEVKNYWNTHL 122 6779*************************************.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MENKQVKPPI KKGLWKPEED LILKTYVETH GEGNWATVSE KSGLMRGGKS CRLRWKNYLR 60 PNIKRGGMSQ EEEDLIIRMH KLLGNRWSLA YPLFLTCRWS LIAGRLPGRT DNEVKNYWNT 120 HLNKRCHTGE RKTTDPGNHK NGNDDKYKNK RQRNSHPTSN TSPKSNPEEL DGKKKEKEES 180 TISDTWIQNA QSMNYYMESP TVPASSDAFV FNNDPFIACW DSFVLLELFG YNDKMYSQVD 240 LETFMP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	153	KNKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	4e-61	MYB family protein