PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640746.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 234aa MW: 27145.5 Da PI: 9.2481

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640746.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd++l+ +v+ +G g+W+t++++ g+ R +k+c++rw +yl XP_021640746.1 12 KGLWKPEEDLILKTYVETHGEGNWATVSEKSGLMRGGKSCRLRWKNYL 59 678*******************************************97 PP
2	Myb_DNA-binding	53.1	7.4e-17	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_021640746.1 65 RGGMSQEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 110 6779****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MENKQVKPPI KKGLWKPEED LILKTYVETH GEGNWATVSE KSGLMRGGKS CRLRWKNYLR 60 PNIKRGGMSQ EEEDLIIRMH KLLGNRWSLI AGRLPGRTDN EVKNYWNTHL NKRCHTGERK 120 TTDPGNHKNG NDDKYKNKRQ RNSHPTSNTS PKSNPEELDG KKKEKEESTI SDTWIQNAQS 180 MNYYMESPTV PASSDAFVFN NDPFIACWDS FVLLELFGYN DKMYSQVDLE TFMP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	141	KNKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	6e-65	MYB family protein