PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021640809.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 795aa    MW: 88872.9 Da    PI: 5.1467
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021640809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.61.4e-2088143156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  XP_021640809.1  88 KKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMK 143
                     688899***********************************************998 PP
2START150.61.3e-472855102206
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     +a + ++elvk+ +a+ep+W +    +ng+evl  +e +k               + ea r+s+vv+m++ +lv  +ld + +W e ++    +a
  XP_021640809.1 285 IAISSLNELVKMCQATEPLWIRNN--DNGKEVLNLEEHAKMfpwllnlkqhsseLRNEATRDSAVVIMNSINLVDAFLDAS-KWMELFPsivaSA 376
                     678899****************99..**********99999***********99999************************.******99999** PP

                     EEEEEECTT.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS
           START  80 etlevissg.....galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167
                     +t++ is+g     g l+l++aelq+lsplvp R+ +f+Ry++q  ++g+w+ivd  +d   ++ +++s+   +++pSg++i++++ng+s+vtwv
  XP_021640809.1 377 KTVQIISPGvsgasGSLHLIYAELQFLSPLVPtREAYFLRYCQQnVEEGTWAIVDFPIDGFHENIQQPSFPLYRRRPSGCVIQDMPNGYSRVTWV 471
                     ********************************************99*************999988788888888********************* PP

                     E-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 168 ehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     eh++ +++ +h+++ ++v sg+a+ga +w+  lqrqce+
  XP_021640809.1 472 EHAEIEEKPVHQIFSQFVYSGMAFGAHRWLGVLQRQCER 510
                     *************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 795 aa     Download sequence    
MYGDCQVLPN MGGNVISSEN HFTSSMGNPN FDFMPSMSFN SFPSLVPKEE SELMMRGKEE  60
MESRSGSEQL EDKSGNEQEI STEQPPKKKR YHRHTARQIQ EMEALFKECP HPDDKQRMKL  120
SQELGLKPRQ VKFWFQNRRT QMKAQQDRAD NIILRAENET LKNDNYRLQA ELRNLICPSC  180
GEPAVIGGIS FEELRIENAR LRDELERVCC IASRYTGRPI QVMQPVPTLV PPSLDLDMNI  240
YSRQFTDSLG SCTEMMPMPM LPETSSFTES GLVLMEEEKT LAMEIAISSL NELVKMCQAT  300
EPLWIRNNDN GKEVLNLEEH AKMFPWLLNL KQHSSELRNE ATRDSAVVIM NSINLVDAFL  360
DASKWMELFP SIVASAKTVQ IISPGVSGAS GSLHLIYAEL QFLSPLVPTR EAYFLRYCQQ  420
NVEEGTWAIV DFPIDGFHEN IQQPSFPLYR RRPSGCVIQD MPNGYSRVTW VEHAEIEEKP  480
VHQIFSQFVY SGMAFGAHRW LGVLQRQCER VASLMARNIS DLGVIPSPEA RKNLMRLAQR  540
MIRTFCVNVS TCGGQSWTAL SESCDDIVRI TTRKITEPGQ PNGIILSAVS TTWMPFPHYQ  600
VFDLIRDEQR ISQLDVLSNG NTLHEVAHIA NGSHPGNCIS LLRINVASNS SQHVDLMLQE  660
SCTDQSGSFV VYTTINVESI QLAMGGEDPS CIPLLPLGFV IIPMESTCKT NTTVNEGNSI  720
QSSQDGNNNN SNSGCLLTVG LQVLANNSTI PSAKLNLSSV NAINNHLRNT VHQITSALNT  780
SAAASCPEPS AAPEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein