PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021641154.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family NF-YA
Protein Properties Length: 125aa    MW: 14160.3 Da    PI: 11.3493
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021641154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA93.13.4e-291874158
       CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                    d p+YVNaKQy++Il+RR  R kle+++kl  k rkpylheSRh h l+R RgsgGrF
  XP_021641154.1 18 DGPIYVNAKQYHGILRRRRLRSKLEARNKL-VKRRKPYLHESRHLHVLNRVRGSGGRF 74
                    57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MAGMTTARVP LPLDLADDGP IYVNAKQYHG ILRRRRLRSK LEARNKLVKR RKPYLHESRH  60
LHVLNRVRGS GGRFLSTKKL QQSDPTSTSK MHVVPNGDAI FIQSEHRFSS LVAQQTNGDL  120
MCGET
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13352RRRRLRSKLEARNKLVKRRK
23353RRRRLRSKLEARNKLVKRRKP
33453RRRRLRSKLEARNKLVKRRK
43454RRRRLRSKLEARNKLVKRRKP
53555RRRRLRSKLEARNKLVKRRKP
64652KLVKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.14e-34NF-YA family protein