PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021641322.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family BBR-BPC
Protein Properties Length: 304aa    MW: 33471.2 Da    PI: 10.0437
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021641322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind357.62.6e-10913041301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkal..verdnk 80 
                     mddd+ + rn+gyyep+  +k +lglqlmss+a+rd+k      + n  + + ++a+++rd         m++  rd+++++r+k l  ++++  
  XP_021641322.1   1 MDDDALNMRNWGYYEPT--FKGHLGLQLMSSMADRDTKHflpgGDPNNIMVGANGAFHPRDcvvsdapvpMNY-VRDSWISQREKFLnmLPQNPS 92 
                     9***9999*******99..********************9**9777777************************.9*******9986521566666 PP

       GAGA_bind  81 llalllvensla.......salpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkk 168
                     ++ l  ++ + +       +++ +++ vl++t+ ++s+q      l+++    r+e   ++  iee ++++ke ++ kkrq +  pk++kakk++
  XP_021641322.1  93 YAVLPETSGAHSmqvlqppNSSNPSYAVLPETSGAHSMQV-----LQPPNSS-RDE---KVGRIEE-PSVNKEGSQLKKRQGGGAPKTPKAKKPR 177
                     6655544433335688888777788899999999999999.....5544444.222...2334433.5666777777888888899999988888 PP

       GAGA_bind 169 kksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqg 263
                     k    +k++++++   +r+k  kks+d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqg
  XP_021641322.1 178 K----PKDNSNNAV--QRVKPAKKSMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQG 266
                     8....233333334..689**************************************************************************** PP

       GAGA_bind 264 afkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     afkk+LekLaaeGy+++np+DL++hWAkHGtnkfvtir
  XP_021641322.1 267 AFKKVLEKLAAEGYNFANPIDLRTHWAKHGTNKFVTIR 304
                     *************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MDDDALNMRN WGYYEPTFKG HLGLQLMSSM ADRDTKHFLP GGDPNNIMVG ANGAFHPRDC  60
VVSDAPVPMN YVRDSWISQR EKFLNMLPQN PSYAVLPETS GAHSMQVLQP PNSSNPSYAV  120
LPETSGAHSM QVLQPPNSSR DEKVGRIEEP SVNKEGSQLK KRQGGGAPKT PKAKKPRKPK  180
DNSNNAVQRV KPAKKSMDVV INGIDMDISG IPIPVCSCTG TPQQCYRWGC GGWQSACCTT  240
NVSMYPLPMS TKRRGARIAG RKMSQGAFKK VLEKLAAEGY NFANPIDLRT HWAKHGTNKF  300
VTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-106BBR-BPC family protein