PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021641324.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family BBR-BPC
Protein Properties Length: 279aa    MW: 30877.4 Da    PI: 10.1657
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021641324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind350.92.8e-10712791301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mddd+ + rn+gyyep+  +k +lglqlmss+a+rd+k      + n  + + ++a+++rd         m++  rd+++++        ++k+l
  XP_021641324.1   1 MDDDALNMRNWGYYEPT--FKGHLGLQLMSSMADRDTKHflpgGDPNNIMVGANGAFHPRDcvvsdapvpMNY-VRDSWISQ--------REKFL 84 
                     9***9999*******99..********************9**9777777************************.9*******........789** PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+++         ++ vl++t+ ++s+q      l+++    r+e   ++  iee ++++ke ++ kkrq +  pk++kakk++k    +k++
  XP_021641324.1  85 NMLPQNP--------SYAVLPETSGAHSMQV-----LQPPNSS-RDE---KVGRIEE-PSVNKEGSQLKKRQGGGAPKTPKAKKPRK----PKDN 157
                     ****655........4899**********99.....5554444.222...2334443.56667777788888999999999999988....3333 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     ++++   +r+k  kks+d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafkk+LekL
  XP_021641324.1 158 SNNAV--QRVKPAKKSMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKL 250
                     34444..689************************************************************************************* PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     aaeGy+++np+DL++hWAkHGtnkfvtir
  XP_021641324.1 251 AAEGYNFANPIDLRTHWAKHGTNKFVTIR 279
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDDDALNMRN WGYYEPTFKG HLGLQLMSSM ADRDTKHFLP GGDPNNIMVG ANGAFHPRDC  60
VVSDAPVPMN YVRDSWISQR EKFLNMLPQN PSYAVLPETS GAHSMQVLQP PNSSRDEKVG  120
RIEEPSVNKE GSQLKKRQGG GAPKTPKAKK PRKPKDNSNN AVQRVKPAKK SMDVVINGID  180
MDISGIPIPV CSCTGTPQQC YRWGCGGWQS ACCTTNVSMY PLPMSTKRRG ARIAGRKMSQ  240
GAFKKVLEKL AAEGYNFANP IDLRTHWAKH GTNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-109BBR-BPC family protein