PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641570.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 613aa MW: 70691.8 Da PI: 5.0235

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.0011	302	322	2	22
EETTTTEEESSHHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt 22 C Cgk F++ + k+H ++ XP_021641570.1 302 YCVVCGKKFKSEKQWKNHEQS 322 5*****************876 PP
2	zf-C2H2	12.1	0.00059	585	603	3	21
ETTTTEEESSHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHir 21 C++Cg+ F ++ L++H++ XP_021641570.1 585 CEKCGEEFESRNKLHKHLS 603 *****************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MASEKRCHYE VLGLSRECTA EEIRSAYKKL ALQRHPDKLI QSGLSQAEAT AQFQELAYAY 60 EVLSDPKERA WYDSHRSQIL FSDPNSANSV PGSVIPNLFS FFSNTVYSGY TDTGKGFYKV 120 YSDVFNKIYA NEVSFCKKLG LRLDSLREAP VMGNLGSPYG QVTAFYNYWL GFCTVMDFCW 180 VDQYDVMAGP NRKSRRVMEE ENKKLRKKAR REYNETVRGL AEFVKKRDKR VIDMMVKKNA 240 ELEKKKEEER ERKKKLEREK MERVRAYEEP EWARLNEEDV EEVEGFEEEG KGKTGNGGKE 300 LYCVVCGKKF KSEKQWKNHE QSKKHKEKVA EFRESFGDDE EETLEDFEED EQGNNEEMGN 360 NEEMVNNVDE VDARFREGFR IREEENGVEN AELRDEEDGF FDVGDGDEVE GFDMSDGNFD 420 DDEVEDEDGD GEMSVLEAMV TGHKSRKSRG SRHVSENFPM EIRAEDVNEL EVMEYNNLKS 480 RRRRGKKERG KNDYGVSEKG DFEERSPDGE INGHDDRQTK ESPSHLFVED ENAGNDNDNA 540 RKNHKNSYHP VNNKGATKKE SNNKTKNLSK GKKGKAAANN SGNACEKCGE EFESRNKLHK 600 HLSDTGHASL KFR

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MASEKRCHYE VLGLSRECTA EEIRSAYKKL ALQRHPDKLI QSGLSQAEAT AQFQELAYAY  60
EVLSDPKERA WYDSHRSQIL FSDPNSANSV PGSVIPNLFS FFSNTVYSGY TDTGKGFYKV  120
YSDVFNKIYA NEVSFCKKLG LRLDSLREAP VMGNLGSPYG QVTAFYNYWL GFCTVMDFCW  180
VDQYDVMAGP NRKSRRVMEE ENKKLRKKAR REYNETVRGL AEFVKKRDKR VIDMMVKKNA  240
ELEKKKEEER ERKKKLEREK MERVRAYEEP EWARLNEEDV EEVEGFEEEG KGKTGNGGKE  300
LYCVVCGKKF KSEKQWKNHE QSKKHKEKVA EFRESFGDDE EETLEDFEED EQGNNEEMGN  360
NEEMVNNVDE VDARFREGFR IREEENGVEN AELRDEEDGF FDVGDGDEVE GFDMSDGNFD  420
DDEVEDEDGD GEMSVLEAMV TGHKSRKSRG SRHVSENFPM EIRAEDVNEL EVMEYNNLKS  480
RRRRGKKERG KNDYGVSEKG DFEERSPDGE INGHDDRQTK ESPSHLFVED ENAGNDNDNA  540
RKNHKNSYHP VNNKGATKKE SNNKTKNLSK GKKGKAAANN SGNACEKCGE EFESRNKLHK  600
HLSDTGHASL KFR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	192	229	RKSRRVMEEENKKLRKKARREYNETVRGLAEFVKKRDK
2	203	211	KKLRKKARR
3	481	488	RRRRGKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	1e-158	C2H2 family protein