PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641660.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 485aa MW: 55315.9 Da PI: 5.8076

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	77.1	2.7e-24	107	206	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+++v++Li a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ ++ XP_021641660.1 107 KWTDSMVRLLIMAVFYIGDEAGSEGndptgkkkagglsQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACKVVENQSL 201 7************99888875422556667777777******************************************559*****9 PP trihelix 82 fdqle 86 ++ ++ XP_021641660.1 202 LETMD 206 99997 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MEPNGLPGGI FSDMGSGMLG LEMSLQQQNT QNPQNSPNLH HPQMVAYAHR ESDHHPQQTM 60 KHAYPYASST TRQKPQSTAS DEDEPGFTGD DSTADGKKKV SPWQRMKWTD SMVRLLIMAV 120 FYIGDEAGSE GNDPTGKKKA GGLSQKKGKW KSVSRAMMEK GFYVSPQQCE DKFNDLNKRY 180 KRVNDILGKG TACKVVENQS LLETMDLSTK MKEEVKKLLN SKHLFFREMC AYHNSCGHGS 240 SGVASGNIHS PEVGTDQSHA QHPQSSHAQQ QRCSHSTENA QFVTNSRTET EGSKLAKRVS 300 NEEDDEEDDD DDDESEEDED DYDEEVDEAI EGNSRGQNSH HGHDDEDEHE EKGSRKRRRT 360 EVFSLSSSLM QQLNNELASV IQDGAKSTWE KKHWMKLRLM QLEEQQVSYQ CQALELEKQR 420 LKWVKFSSKK EREMERAKLE NERRRLESER MVLLIRQKEL EFLDLHQQQQ QLSSNKRSEP 480 SSTTG

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MEPNGLPGGI FSDMGSGMLG LEMSLQQQNT QNPQNSPNLH HPQMVAYAHR ESDHHPQQTM  60
KHAYPYASST TRQKPQSTAS DEDEPGFTGD DSTADGKKKV SPWQRMKWTD SMVRLLIMAV  120
FYIGDEAGSE GNDPTGKKKA GGLSQKKGKW KSVSRAMMEK GFYVSPQQCE DKFNDLNKRY  180
KRVNDILGKG TACKVVENQS LLETMDLSTK MKEEVKKLLN SKHLFFREMC AYHNSCGHGS  240
SGVASGNIHS PEVGTDQSHA QHPQSSHAQQ QRCSHSTENA QFVTNSRTET EGSKLAKRVS  300
NEEDDEEDDD DDDESEEDED DYDEEVDEAI EGNSRGQNSH HGHDDEDEHE EKGSRKRRRT  360
EVFSLSSSLM QQLNNELASV IQDGAKSTWE KKHWMKLRLM QLEEQQVSYQ CQALELEKQR  420
LKWVKFSSKK EREMERAKLE NERRRLESER MVLLIRQKEL EFLDLHQQQQ QLSSNKRSEP  480
SSTTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	355	359	RKRRR
2	355	360	RKRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	1e-76	Trihelix family protein