PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641676.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 225aa MW: 26409.8 Da PI: 9.1148

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641676.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.4e-18	64	117	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t++q e Le+ F+++ +++ +++ +L+++lgL+ rq+ vWFqNrRa++k XP_021641676.1 64 KKKRLTNDQSESLERSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWK 117 45679************************************************9 PP
2	HD-ZIP_I/II	117.4	8.2e-38	63	154	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+++q+++LE+sF+ee kL+p+rK++l+reLglqprq+avWFqnrRAR+k+kqlE+ y+ Lk+++d ++ e+++L++ev +L+ l+ XP_021641676.1 63 EKKKRLTNDQSESLERSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWKAKQLERLYDELKQEFDVVSVEKQKLQEEVMKLKGILQ 154 69*************************************************************************************97776 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MDWHGNLRTF VSRPENSFNF LYNYSFDQYN NQGMDVKHPA AMAKTPRAIV PAMEKLSYGN 60 IYEKKKRLTN DQSESLERSF QEEIKLDPDR KMKLSRELGL QPRQIAVWFQ NRRARWKAKQ 120 LERLYDELKQ EFDVVSVEKQ KLQEEVMKLK GILQEQATKK QVSKGYTDIS GEETVESTWV 180 GIRSSGEKPR GTSHQHQIAE CNYHLNVDEY NPVTSPYWAV LPSYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	93	KKKRLTNDQSESLERSFQEEIKLDPDRKMK
2	112	120	RRARWKAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	4e-55	HD-ZIP family protein