PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641702.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 295aa MW: 33532.8 Da PI: 7.6938

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.4e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W+++Ed+ll+ ++k +G g W+ +r+ g++R++k+c++rw++yl XP_021641702.1 14 RGIWSAWEDKLLISYIKVHGEGKWTDLPRRAGLKRCGKSCRLRWLNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	58.5	1.5e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++Edel+++++k+lG++ W++Ia +++ gRt++++k++w++yl XP_021641702.1 67 RGSFSADEDELIIRLHKLLGNR-WSLIAGRLP-GRTDNDIKNYWNTYL 112 899*****************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MGRKPCCVKE EVNRGIWSAW EDKLLISYIK VHGEGKWTDL PRRAGLKRCG KSCRLRWLNY 60 LRPDIKRGSF SADEDELIIR LHKLLGNRWS LIAGRLPGRT DNDIKNYWNT YLRKKVEEKK 120 INGTSASKKQ ANDFKGRKPM HNQSQLYLNN PPAATSSHRV IRTKAVRCSK VIVVPEPLCY 180 NNNNDDEAAE KKMESERPCS SSSAILHEDK CLDFDINDFL SMETPNSSVL DQSREINGWH 240 GTTEDGKCWD FPVSSAVEAE LDVLMGNSND DANLFQPSDA LDLKSISNFL GLEDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	6e-61	MYB family protein