PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021641849.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 218aa    MW: 24979.8 Da    PI: 8.6888
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021641849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF56.53.6e-181862549
                    SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                     +sn  vtfskR+ g++KKA+EL +LC+ae+ +i+fs+  k++ +
  XP_021641849.1 18 KESNLLVTFSKRKYGVFKKASELATLCGAEITIIVFSPGRKIFSF 62
                    678999********************************9988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MSRKSKGRQK LEMVKIPKES NLLVTFSKRK YGVFKKASEL ATLCGAEITI IVFSPGRKIF  60
SFGHPSVETV IDRFLSGNPP PTSGAMQLVE AYRHARVCEL NMELNQIVTQ LEMEKKRGEE  120
LEQMGNVSED QRWWESPIEE LDLPRLEQLK ASLEVLRQNV TKRAEQVLMH TTNHPLQFYT  180
PKPGTGPLPF DPKSELFNTN MMHAYNFNLG FHNGNELF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.18e-60M-type_MADS family protein