PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641956.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 245aa MW: 27619.3 Da PI: 7.7528

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.6	2.9e-18	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ll ++v+ +G g W ++a++ g++R++k+c++rw++yl XP_021641956.1 13 RGAWTSDEDQLLREYVRNHGEGKWGKVAKETGLKRCGKSCRLRWLNYL 60 89********************************************97 PP
2	Myb_DNA-binding	52.7	9.6e-17	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_021641956.1 66 RGNITEDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNST 110 7999****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MGRNPCPEGR LNRGAWTSDE DQLLREYVRN HGEGKWGKVA KETGLKRCGK SCRLRWLNYL 60 RPGIKRGNIT EDEEDLIIRL HKLLGNRWSL IAGRLPGRTD NEIKNYWNST LRKKIEDKSK 120 PSKNEDKKTI KGTCSTMVMK LGSCTDTPPQ QNNVTNITGL VIEPSVSKER NNLLMKNMIE 180 ESDSDECLLP IASSCDWDLM LDLNGEQISL SDFLHTDFSN IIHVDGSSPS SSAEAAFLSE 240 AVLRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	8e-57	MYB family protein