PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642184.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 263aa    MW: 30466.7 Da    PI: 5.285
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.62.4e-1957109456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++++t +q+++Le+ Fe ++++  e++++LA++lgL+ rqV +WFqNrRa++k
  XP_021642184.1  57 KRRLTLDQVKALEKNFEVENKLEPERKQKLAEELGLQPRQVAIWFQNRRARWK 109
                     557999**********************************************9 PP
2HD-ZIP_I/II123.21.2e-3956147293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     kkrrl+ +qvk+LE++Fe e+kLeperK++la+eLglqprqva+WFqnrRAR+ktkqlE++y aLk++y+alk + ++Le+++e+L+ ++ke
  XP_021642184.1  56 KKRRLTLDQVKALEKNFEVENKLEPERKQKLAEELGLQPRQVAIWFQNRRARWKTKQLEREYVALKANYEALKLNYDSLERQNESLTLQVKE 147
                     9**************************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MKRFSSSDSF AASVSISSSK EEETHKPSQG YAREFQAMLD SLEEEDNTEE ATHTLKKRRL  60
TLDQVKALEK NFEVENKLEP ERKQKLAEEL GLQPRQVAIW FQNRRARWKT KQLEREYVAL  120
KANYEALKLN YDSLERQNES LTLQVKELKA KLREENADSS HSVKEEPPVS ESENNVSVHS  180
QSHEFSDNNN SNPIIKDQSN GLSSHALMNW IQLSESRTIL GNGFQVYQPH VKLEEQNVFS  240
TVESCNFFSV DQAPTLHWYY PEQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15685KKRRLTLDQVKALEKNFEVENKLEPERKQK
2104112RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.14e-53HD-ZIP family protein