PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642254.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 162aa    MW: 18855.1 Da    PI: 9.9321
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF466.7e-151050242
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                     i+n+s r+ tf kRr+g+lKK  EL +LC++ ++ iifs 
  XP_021642254.1 10 LISNESARKLTFKKRRAGLLKKLMELTTLCGVIACAIIFSA 50
                    59*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MGRRKVKHEL ISNESARKLT FKKRRAGLLK KLMELTTLCG VIACAIIFSA YNSSPDIWPS  60
HPEAVSVLEK FKRLPPKKQS KYMMDQESFL TRNISKLNEK LEKQRKKNER IELELIYAKC  120
ITGENLDPLN SLMNMNDISH LLKENLEYMT DRIDAAKDKI EE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RRKVKHELISNESARKLTFKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22590.24e-38M-type_MADS family protein