PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642286.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

YABBY

Protein Properties

Length: 169aa MW: 18773.5 Da PI: 8.9609

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	146	3.9e-45	10	153	2	163
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 d++ se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l ++ + + + ++l +++++ s k +s+s+s XP_021642286.1 10 DLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPL---------QGQCL---DHQLILQKQDFFSDLRKGQSSSSSC 92 77899***********************************98553333322.........22222...2234444555555444444443333 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +s + +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa + XP_021642286.1 93 TS------GEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 153 33......4456799999*********************************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MNLEEKATMD LVPPSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP 60 PLQGQCLDHQ LILQKQDFFS DLRKGQSSSS SCTSGEPLSP KAPFVVKPPE KKHRLPSAYN 120 RFMKEEIQRI KAANPEIPHR EAFSTAAKNW ARYIPNSAPG SVSGRSNSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	2e-69	YABBY family protein