PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642287.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

YABBY

Protein Properties

Length: 167aa MW: 18517.2 Da PI: 8.7676

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	60.8	5.8e-19	10	56	2	48
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsv 48 d++ se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l + XP_021642287.1 10 DLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFL 56 77899*************************************98554 PP
2	YABBY	96.3	6.9e-30	96	151	108	163
YABBY 108 evprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa + XP_021642287.1 96 LSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 151 5789999***********************************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MNLEEKATMD LVPPSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP 60 PLQGQCLDHQ LILQDFFSDL RKGQSSSSSC TSGEPLSPKA PFVVKPPEKK HRLPSAYNRF 120 MKEEIQRIKA ANPEIPHREA FSTAAKNWAR YIPNSAPGSV SGRSNSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	5e-68	YABBY family protein