PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642335.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 599aa    MW: 67343.7 Da    PI: 4.4369
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS281.72.1e-862245942374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.......fsevsP 89 
                      e Ll+ Ae + ++++ +a++lL++ +  +s++g+p+qR+a yf+e L++r+  +  ++ ++ + +++    s +  +a+++        +++ P
  XP_021642335.1 224 AESLLASAEKIGNQQFDCASRLLKQCNSFSSNEGNPVQRVAYYFAEVLQERIDIEIGRITSKEQWKKQ----SFDIDKAMTTpnptalaSHQAIP 314
                     57899************************************************955555543333333....33333333333344556899*** PP

            GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                     + ++ h++  qaIl+ v+ ++r+HiiDf +  GlQW  L+qaL sR e p   l+iT+++      ++ +e+tg+rL+ fA+++++ f+f+++v+
  XP_021642335.1 315 FCQILHFAGIQAILDNVDDASRIHIIDFTLRCGLQWTVLMQALVSRCECPVeLLKITAIAT---AWEDLIETTGKRLTAFAQTMNLAFSFKIVVV 406
                     ***********************************************7665499*******...579999************************* PP

            GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                     +++ +l+ + L+++ +E +a+ +     +l     +l+++ +++++++k++ P v+vv+e e++ ns++Fl+rf+eal ++sa fd+l+a + r+
  XP_021642335.1 407 SDVLELKEDLLEIDDEEIVAIYSDNLPRSL----IALPKRLESIMRMIKNIIPCVMVVAEIESNQNSPTFLNRFIEALFFFSAYFDCLDACMERD 497
                     *********************998755555....566777777**************************************************** PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                     +++r  +E+++lg+ i+n++a eg+e++ r ++l  Wr+   ++G+ ++ ls++   qa+l+++k++ ++  +++++ +sl++gWk+ pL s+Sa
  XP_021642335.1 498 DSNRLILEAMYLGKGIRNAIAIEGEEKTIRSRKLDAWRSFYARFGMVEIDLSSSSLLQANLIVKKFAcGNYCTLNKNGKSLIIGWKGTPLHSLSA 592
                     *******************************************************************88888999999***************** PP

            GRAS 373 Wr 374
                     W+
  XP_021642335.1 593 WK 594
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    
MENAMFSFDE LNCFGFQDEF ISTNVVSEST DGGDKGTNGP SYGAQEWRES AGIDSLCSDY  60
GFYKENLWEQ ELLISSYEEQ ERLQQSFLDC EQFDDFKFNI LSPPLETCLE EITKLGEIQK  120
GIQEVEPKED KSYPISSESL QLLRSYNKGF KQLSSGRVIV PINCTPSTIA AGQGLSTEEI  180
IRIAGARFIQ SSCQGVEVAS IFNNPFYLSS SGLSDEDAKM VKLAESLLAS AEKIGNQQFD  240
CASRLLKQCN SFSSNEGNPV QRVAYYFAEV LQERIDIEIG RITSKEQWKK QSFDIDKAMT  300
TPNPTALASH QAIPFCQILH FAGIQAILDN VDDASRIHII DFTLRCGLQW TVLMQALVSR  360
CECPVELLKI TAIATAWEDL IETTGKRLTA FAQTMNLAFS FKIVVVSDVL ELKEDLLEID  420
DEEIVAIYSD NLPRSLIALP KRLESIMRMI KNIIPCVMVV AEIESNQNSP TFLNRFIEAL  480
FFFSAYFDCL DACMERDDSN RLILEAMYLG KGIRNAIAIE GEEKTIRSRK LDAWRSFYAR  540
FGMVEIDLSS SSLLQANLIV KKFACGNYCT LNKNGKSLII GWKGTPLHSL SAWKFILEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.14e-50GRAS family protein