PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642385.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 226aa    MW: 25924.6 Da    PI: 10.2197
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.86.1e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++ rqvtfskRrng+lKKA+EL +LCdaev viifsstgkly+++s
  XP_021642385.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGKLYDFAS 59
                    8***********************************************86 PP
2K-box87.92e-2981169997
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                        ++ + +q+e+a L+++++nLq+++R+++Ge+L+ Ls+keLq+Le++Le sl+ +R+kK+++l+++i+el +k + +++en +L kk
  XP_021642385.1  81 SPMSEVKFWQREAAMLRQQLQNLQENHRQMMGEELSGLSIKELQNLESRLEMSLRGVRTKKDQILMDEIQELNRKGNLIHQENVELYKK 169
                     5667899*******************************************************************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVIIFSS TGKLYDFAST  60
SMKSVIERYN KSKEEQHQIG SPMSEVKFWQ REAAMLRQQL QNLQENHRQM MGEELSGLSI  120
KELQNLESRL EMSLRGVRTK KDQILMDEIQ ELNRKGNLIH QENVELYKKA YGAGNINGVN  180
RDYPRTNGLG IVEESNVPVH LQLSQPQQQN YDTQARATKL GRLQLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.11e-103MIKC_MADS family protein