PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642488.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family SBP
Protein Properties Length: 167aa    MW: 17591.2 Da    PI: 10.0197
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642488.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP74.32e-2373119248
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 
                     Cq+e+C+adls+ak yhrrhkvC  h+ka+ vlv+g++qrfCqqCs 
  XP_021642488.1  73 CQAEKCTADLSDAKPYHRRHKVCANHAKAQIVLVAGIRQRFCQQCSS 119
                     *********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MDGKGKLRMM GNMTKKELTE HGWESSDDDL KMGCVESDVE SSKKNKVVAG GGGGGGGRIG  60
LGGGSGSGGM RSCQAEKCTA DLSDAKPYHR RHKVCANHAK AQIVLVAGIR QRFCQQCSSV  120
AGFMSYGNLM KPKGVVGGVW PDTMNGEGRM LLNLIRKVQA TKGQAVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15464GGGGRIGLGGG
25565GGGGRIGLGGG
35666GGGGRIGLGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.19e-19SBP family protein