PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642528.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 457aa    MW: 52116.5 Da    PI: 6.6518
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS306.85e-94754541373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl  A+av++++l  a   L++l + +s +gd+++R++ayf+ +Laarl+   s  y+ +  ++ts    +ee+ a++ ++ vsP+ +++h
  XP_021642528.1  75 LIHLLLITATAVDENNLCTALDNLTELYQSVSLTGDSVHRVVAYFADGLAARLLTRRSPFYDMIMKEPTS----EEEFLAFTDLYRVSPYCQLAH 165
                     689****************************************************99****988888875....788889999************ PP

            GRAS  96 ltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlv 182
                     +taNqaIlea+e+e     +++H+iDfd+s+G+QWp+L+q+L++++  +++ slRiTg g+    s eel+et++rL +f + + ++ fef+ l 
  XP_021642528.1 166 FTANQAILEAFEKEeesnnRALHVIDFDVSYGFQWPSLIQSLSEKAtsGNQISLRITGYGR----SLEELQETESRLVSFSKGFrNLMFEFQGL- 255
                     ************9988887789**********************99856667*********....9****************9758*******8. PP

            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                        l   +l +Lr k++E++aVnlv++l +l  + +++++    +Lk + sl+P +vv+veqe +++  sFl rf+e+l++++a+fdsle  lp 
  XP_021642528.1 256 ---LRGSKLINLRKKKNETVAVNLVFHLNTLN-DFLKISD----TLKSIHSLNPSIVVLVEQEGSRSPRSFLSRFMESLHHFAAMFDSLEDCLPL 342
                     ...666677899****************9996.7777777....*************************************************** PP

            GRAS 278 eseerikvErellgreivnvvacegae...rrerhetlekWrerleeaGFkpvplsekaakqaklllrkv..........k.sdgyrve.eesgs 357
                     es+er ++E+ llg+ei+ ++   +++      r e++e+W+ r+e+ GF+ ++ls+k   qaklll+            + ++g+rv   ++g 
  XP_021642528.1 343 ESSERLSIEKNLLGKEIKTMLNYDKDNndsNCPRYEKMETWKGRMESHGFSGIKLSSKSLIQAKLLLKIRthysplqfdgEsNNGFRVFlRDDGR 437
                     *********************99887722245699*******************************97431111111111113445555544777 PP

            GRAS 358 lv.lgWkdrpLvsvSaW 373
                     ++ lgW+dr L+++SaW
  XP_021642528.1 438 AIsLGWQDRCLLTASAW 454
                     767************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    
MTEGLEEEEE LLNLSLAIVT DSGGDRKRKR KIRALLDPYE GCEGKIFRLL QMREQMLKPG  60
FKRKGVVEDG KGLHLIHLLL ITATAVDENN LCTALDNLTE LYQSVSLTGD SVHRVVAYFA  120
DGLAARLLTR RSPFYDMIMK EPTSEEEFLA FTDLYRVSPY CQLAHFTANQ AILEAFEKEE  180
ESNNRALHVI DFDVSYGFQW PSLIQSLSEK ATSGNQISLR ITGYGRSLEE LQETESRLVS  240
FSKGFRNLMF EFQGLLRGSK LINLRKKKNE TVAVNLVFHL NTLNDFLKIS DTLKSIHSLN  300
PSIVVLVEQE GSRSPRSFLS RFMESLHHFA AMFDSLEDCL PLESSERLSI EKNLLGKEIK  360
TMLNYDKDNN DSNCPRYEKM ETWKGRMESH GFSGIKLSSK SLIQAKLLLK IRTHYSPLQF  420
DGESNNGFRV FLRDDGRAIS LGWQDRCLLT ASAWHCV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12631RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.12e-56GRAS family protein