PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642549.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 695aa    MW: 79099.8 Da    PI: 6.5699
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3841.8e-1173226913374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+av+ +d++ a++lL ++ +++s +gd +qRla yf +AL++rla++++  y  l +++t+   +s+ l+a++++++++P+ ++s++ 
  XP_021642549.1 322 TLLTQCAQAVAISDQRTATELLRQIGQHSSAYGDGNQRLAYYFSKALETRLAGTSTPKYTPLVSNKTP---VSDILKAYQVYVKACPFKRMSNFF 413
                     68***************************************************888888888888887...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aNq+I + +++++r+HiiDf+i +G+QWp+L+q L++Rp+gpp+lRiTg++ p++g   +e++eetg+rL++++e+++vpfe+nv +a+++e+++
  XP_021642549.1 414 ANQTIFKLAQKATRLHIIDFGILYGFQWPCLIQRLSQRPGGPPKLRITGIELPQPGfrPAERVEETGRRLRRYCERFNVPFEYNV-IAQKWETIK 507
                     *******************************************************9****************************9.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +e+L+++++E+++Vn+ ++l +l+d++v  +s+rd+vLkl+++++P+++++   +  +n++ F++rf eal ++s++fd++++++p e+e+r  +
  XP_021642549.1 508 YEDLNINRDEMTVVNCLHRLRNLPDDTVVANSARDAVLKLIRRIKPDLFIHGVVNGTYNAPFFVTRFREALFHFSSMFDMFDVNVPCEDEQRLLY 602
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+e++gr+i+nv+aceg+er+er et+++W+ r  +aGF+++ l++++ k++++ +r  + + + v+e+ g++++gWk+r ++++S+W+
  XP_021642549.1 603 EKEIFGRDIMNVIACEGTERVERPETYRQWQVRNIRAGFRQLLLDQEILKKVRSTVRSEYHKDFVVDEDGGWMLQGWKGRVIYALSVWK 691
                     **********************************************************99888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    
MDTLLQEFPN SMNRFNFDHY PVSFSPNRNL LNGYELNNNL SNPYSPVPSF DPQPPNDLTS  60
SSPSSLSSEG HDPNNNVVLK YISDMLMEED LEGKTCMLQD CLALQAAEKS LYDVLGQEYP  120
HSLYHCSQNV QSPDDTSPWS SSVDSSKSYP AAVNTSVENS NWIFDRVDLD LHGIQSSLID  180
SPESTLLGPY FQSDIHPLTV VRQRIGDGDS LVLAPKSSPE TERDSSPNSS RGRKNHQRED  240
GDYLEEERSN KHSAISLAES EQSEMFDKVL LCPSENSKSE ARALHEKSQN GASRNGQGKG  300
SNGRTTRGRR QGNKGEVVDL PTLLTQCAQA VAISDQRTAT ELLRQIGQHS SAYGDGNQRL  360
AYYFSKALET RLAGTSTPKY TPLVSNKTPV SDILKAYQVY VKACPFKRMS NFFANQTIFK  420
LAQKATRLHI IDFGILYGFQ WPCLIQRLSQ RPGGPPKLRI TGIELPQPGF RPAERVEETG  480
RRLRRYCERF NVPFEYNVIA QKWETIKYED LNINRDEMTV VNCLHRLRNL PDDTVVANSA  540
RDAVLKLIRR IKPDLFIHGV VNGTYNAPFF VTRFREALFH FSSMFDMFDV NVPCEDEQRL  600
LYEKEIFGRD IMNVIACEGT ERVERPETYR QWQVRNIRAG FRQLLLDQEI LKKVRSTVRS  660
EYHKDFVVDE DGGWMLQGWK GRVIYALSVW KPVQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein