PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642552.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 255aa    MW: 29339.6 Da    PI: 9.3966
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS170.51.4e-5214252139373
            GRAS 139 ppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvk 232
                     + slRiTg g+    s eel+et++rL +f + + ++ fef+ l    l   +l +Lr k++E++aVnlv++l +l  + +++++    +Lk + 
  XP_021642552.1  14 QISLRITGYGR----SLEELQETESRLVSFSKGFrNLMFEFQGL----LRGSKLINLRKKKNETVAVNLVFHLNTLN-DFLKISD----TLKSIH 95 
                     569********....9****************9758*******8....666677899****************9996.7777777....****** PP

            GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae...rrerhetlekWrerleeaGF 324
                     sl+P +vv+veqe +++  sFl rf+e+l+y++a+fdsle  lp es+er ++E+ llg+ei+ ++   +++      r e++e+W+ r+e+ GF
  XP_021642552.1  96 SLNPSIVVLVEQEGSRSPRSFLSRFMESLHYFAAMFDSLEDFLPLESSERLSIEKNLLGKEIKTMLNYDKDNndsNCPRYEKMETWKGRMESHGF 190
                     ******************************************************************99887722245699*************** PP

            GRAS 325 kpvplsekaakqaklllrkv..........k.sdgyrve.eesgslv.lgWkdrpLvsvSaW 373
                     + ++ls+k   qaklll+            + ++g+rv   ++g ++ lgW+dr L+++SaW
  XP_021642552.1 191 SGIKLSSKSLIQAKLLLKIRthysplqfdgEsNNGFRVFlRDDGRAIsLGWQDRCLLTASAW 252
                     ****************97431111111111113445555544777767************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MHTILTHSSF FGNQISLRIT GYGRSLEELQ ETESRLVSFS KGFRNLMFEF QGLLRGSKLI  60
NLRKKKNETV AVNLVFHLNT LNDFLKISDT LKSIHSLNPS IVVLVEQEGS RSPRSFLSRF  120
MESLHYFAAM FDSLEDFLPL ESSERLSIEK NLLGKEIKTM LNYDKDNNDS NCPRYEKMET  180
WKGRMESHGF SGIKLSSKSL IQAKLLLKIR THYSPLQFDG ESNNGFRVFL RDDGRAISLG  240
WQDRCLLTAS AWHCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.12e-33GRAS family protein