PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642714.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 217aa MW: 24988.6 Da PI: 8.6181

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.6	2.2e-30	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++gklye++ XP_021642714.1 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFA 58 79***********************************************8 PP
2	K-box	83.1	6.1e-28	79	170	6	97
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++++++++e l++e+a++ k+ie L+ ++R+llGe+L+s++++eLqq+eqqLe+s+++iR++Kn++++eqie+l++ke +l en +L++k XP_021642714.1 79 DEKKSDENMELLKTEAANMVKKIELLEISKRKLLGEGLDSCTVEELQQIEQQLERSVSSIRARKNQVFKEQIERLKEKESQLAAENARLSEK 170 4458999**********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIVFSP RGKLYEFANS 60 SMQETIERYR RHVKDNQIDE KKSDENMELL KTEAANMVKK IELLEISKRK LLGEGLDSCT 120 VEELQQIEQQ LERSVSSIRA RKNQVFKEQI ERLKEKESQL AAENARLSEK CGVQPWEGLK 180 VVGETRYCEE SSLVSDVETE LFIGLPETRT KGHPPRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	1e-84	MIKC_MADS family protein