PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642736.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 365aa MW: 37952.5 Da PI: 7.9213

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.4	3.8e-19	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l +v+++G+++W++I++ ++ gR++k+c++rw + XP_021642736.1 12 KGPWSPEEDEALQMLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	56.1	8.5e-18	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++ +G++ W+tIar ++ gRt++ +k++w++ XP_021642736.1 66 AFTPEEDETIIRAHAHFGNK-WATIARLLN-GRTDNAIKNHWNST 108 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MAVTGKDVDR IKGPWSPEED EALQMLVQKH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 QVEHRAFTPE EDETIIRAHA HFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSSMVDD 120 VSFGSRDAYD GNLGGNGQPL KRSVSAGSGM PVSTGLYMNP GSPSGSDVSD SSVPVLSSSH 180 VYRPVPRAAP VFPPVETTSS SNNNDPPTSL SLSLPGADSS EVSNRAAEST PVRVTESTPA 240 TNTISLVPAM NQVSLAPAQV EEAAAAVAAG MQQGAVNGGV GGGFVGFTAE FMAVMHEMIK 300 MEVRNYMMEQ SRGGGSGGGV GMCRVGGGGG GGGGSGGGVG MCFQAAGGEG FRNVAMNRIG 360 VSKIE

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MAVTGKDVDR IKGPWSPEED EALQMLVQKH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP  60
QVEHRAFTPE EDETIIRAHA HFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSSMVDD  120
VSFGSRDAYD GNLGGNGQPL KRSVSAGSGM PVSTGLYMNP GSPSGSDVSD SSVPVLSSSH  180
VYRPVPRAAP VFPPVETTSS SNNNDPPTSL SLSLPGADSS EVSNRAAEST PVRVTESTPA  240
TNTISLVPAM NQVSLAPAQV EEAAAAVAAG MQQGAVNGGV GGGFVGFTAE FMAVMHEMIK  300
MEVRNYMMEQ SRGGGSGGGV GMCRVGGGGG GGGGSGGGVG MCFQAAGGEG FRNVAMNRIG  360
VSKIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	3e-82	MYB family protein