PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642777.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 592aa MW: 63134.2 Da PI: 6.2882

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.2	3.3e-07	198	242	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r++W + Ed l+ av+++G g+W+ I r Rt+ q+ rw XP_021642777.1 198 RKPWLESEDMELIAAVQKYGEGNWANILRSEFkWDRTASQLSQRW 242 789************************986554556666666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MIEKTKKQKR GIISEEDIST LLQRHTANTV LALLQEVAQF EGVKFDWNAL VKKTRTGISN 60 AREYQMLWRH LAYGHALLEK LEDGAQPLDD DSDLEYELEA FPDVSSEAST EAAACVKVLI 120 ASGLSSDSVH PNSTTVEAPL TINIPNGQAV NSQPATLRGM NITVPVSVQK QPLPAVTSTE 180 GLDANGSVSG TIPARRKRKP WLESEDMELI AAVQKYGEGN WANILRSEFK WDRTASQLSQ 240 RWAIIRKRRL GNWNLGGNTS GVQITEAQRA ALHAMNLALD LPVKNTFTNN SGETSSSQLQ 300 SQRPFATKSS SVGPLGSAAN SQVAVNKTVK PDFSSNTVRA AAVAAGARIT TQSDAASLHK 360 ATQAKSAVHI MPAAGSSISS MAGGASSHFE AHPNVHFDDL AAVSFPTHPA VSSNGQHLAL 420 EAASSPTTQP TPISSTAMNM SSEQAHAELQ SKQDVTKEQV KEHGGLVCGN APREQVQERK 480 AALPNQEAEF KTQVAVAQSS NASRKVEMGE SDMVDVPGNQ AEGSQNSNGD KSTYLAVGKD 540 EYQSAVQENC GNQSTSGKQA DLRSMATDEC SKKVEAVSKA EPCNVITEGG LV

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MIEKTKKQKR GIISEEDIST LLQRHTANTV LALLQEVAQF EGVKFDWNAL VKKTRTGISN  60
AREYQMLWRH LAYGHALLEK LEDGAQPLDD DSDLEYELEA FPDVSSEAST EAAACVKVLI  120
ASGLSSDSVH PNSTTVEAPL TINIPNGQAV NSQPATLRGM NITVPVSVQK QPLPAVTSTE  180
GLDANGSVSG TIPARRKRKP WLESEDMELI AAVQKYGEGN WANILRSEFK WDRTASQLSQ  240
RWAIIRKRRL GNWNLGGNTS GVQITEAQRA ALHAMNLALD LPVKNTFTNN SGETSSSQLQ  300
SQRPFATKSS SVGPLGSAAN SQVAVNKTVK PDFSSNTVRA AAVAAGARIT TQSDAASLHK  360
ATQAKSAVHI MPAAGSSISS MAGGASSHFE AHPNVHFDDL AAVSFPTHPA VSSNGQHLAL  420
EAASSPTTQP TPISSTAMNM SSEQAHAELQ SKQDVTKEQV KEHGGLVCGN APREQVQERK  480
AALPNQEAEF KTQVAVAQSS NASRKVEMGE SDMVDVPGNQ AEGSQNSNGD KSTYLAVGKD  540
EYQSAVQENC GNQSTSGKQA DLRSMATDEC SKKVEAVSKA EPCNVITEGG LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	2e-77	MYB_related family protein