PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642782.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 25754.7 Da    PI: 8.4715
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.61.7e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n + rqvtfskRr g++KKAeELSvLCdaeva+iifs tgkl+ey+s
  XP_021642782.1  9 KKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIIFSATGKLFEYCS 59
                    68***********************************************96 PP
2K-box44.85.5e-16891701798
           K-box  17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      +++ a+L ke+ +   ++R++ Ge+L+ L+l+eLqqLe+ Le +l+++ ++K + ++++i+ l kk  +l eenk+L++k+
  XP_021642782.1  89 ENNNRARLTKEVAEKTYQLRQMRGENLQGLNLEELQQLEKLLEAGLTRVLETKGDKIMNEISMLEKKGAQLLEENKRLKQKM 170
                     567788999999999999**************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MAREKIKIKK IDNITARQVT FSKRRRGLFK KAEELSVLCD AEVALIIFSA TGKLFEYCSS  60
SMKDIIARYN LHSNNLDKLD RPSLELELEN NNRARLTKEV AEKTYQLRQM RGENLQGLNL  120
EELQQLEKLL EAGLTRVLET KGDKIMNEIS MLEKKGAQLL EENKRLKQKM TTFWCKGKRP  180
VHLESDVAVQ QEEGMSSESV TNICSCSSGP PLGDDSSDTS LKLGLPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-79MIKC_MADS family protein