PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642881.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 872aa MW: 96118.3 Da PI: 7.1924

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.8	4.8e-19	348	447	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e++ l+++d +gr+W++++++ +++s++yvl+ G ++ +L++gD+++F++++ +++ XP_021642881.1 348 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGVPLRIQDFKGREWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTITFSRID-PGGK 440 99************************666778999***********99899999999.*******************887.7887 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_021642881.1 441 LVMGFRK 447 8888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 872 aa Download sequence
MGSKVCMNAS CGTTTTREWK RGWRLRSGGY ACLCYTCGYF VNWIWIAVMC YNMVSSTYDD 60 SVYCDTFHLE ESGWRECKIC SKRLHCGCIA STYLLEILDF GGVGCTSCAK ISQLHSVRSI 120 HSNEISNAFG SVTTNNAVGL ESTPPENRVA GSALDEGKLA QLCRIMEANK PTLLCQSEGA 180 DTNASPGHFR QEEVIHPIGE AGTGFSNESQ LSVGISRFAK PDSIRPILEM RDMNGSLVPS 240 LTMTLGAPSG TTSFGPYPCG AVEGRGKSIT PPFQQGQRSR PILPKLPKPG SAGSSETNNA 300 VVPELRIART PAEGRGKNQL LPRYWPRITD LELQQLSGDL NSNIVPLFEK VLSASDAGRI 360 GRLVLPKACA EAYFPPISQS EGVPLRIQDF KGREWTFQFR FWPNNNSRMY VLEGVTPCIQ 420 SMQLQAGDTI TFSRIDPGGK LVMGFRKATN NSDTQEAQTT ALPSGTASAE TSFSADGDIG 480 WNKGESQGGK INGDARHQPT AEKKRNRNIG PKSKRLLMHR EDALELRLTW EEAQDLLRPP 540 PSVKPSIVTI EDHEFEEFDE PPVFGKRTIF AHQSSGGQEQ WAQCDDCSKW RKLPEHVLLP 600 PKWTCSDNIW DSSRCLCSAP EEISPKDLDN LLRLSKDFKK RRIVGRHKPS PECEPSGLDA 660 LASAAVLGDN IGDTGEPSVG ATTKHPRHRS GCTCIVCIQP PSGKGKHNPT CTCNVCMTVK 720 RRFKTLMLRK KKRQSEEHEA EISQKDNNDH KDESEMISKL SNAVLPVSNS GNEVSQNRKQ 780 TEVAETSAGS LDLNCHPNRD EMQLDMPGLS MMNIGDPFDS YTKQNGLPNL MCDRHSSFGP 840 CLHSQTNGEY PRTLSDEAFH DSMGWNRESR GD

Sequence ? help Back to Top

Protein Sequence Length: 872 aa Download sequence

MGSKVCMNAS CGTTTTREWK RGWRLRSGGY ACLCYTCGYF VNWIWIAVMC YNMVSSTYDD  60
SVYCDTFHLE ESGWRECKIC SKRLHCGCIA STYLLEILDF GGVGCTSCAK ISQLHSVRSI  120
HSNEISNAFG SVTTNNAVGL ESTPPENRVA GSALDEGKLA QLCRIMEANK PTLLCQSEGA  180
DTNASPGHFR QEEVIHPIGE AGTGFSNESQ LSVGISRFAK PDSIRPILEM RDMNGSLVPS  240
LTMTLGAPSG TTSFGPYPCG AVEGRGKSIT PPFQQGQRSR PILPKLPKPG SAGSSETNNA  300
VVPELRIART PAEGRGKNQL LPRYWPRITD LELQQLSGDL NSNIVPLFEK VLSASDAGRI  360
GRLVLPKACA EAYFPPISQS EGVPLRIQDF KGREWTFQFR FWPNNNSRMY VLEGVTPCIQ  420
SMQLQAGDTI TFSRIDPGGK LVMGFRKATN NSDTQEAQTT ALPSGTASAE TSFSADGDIG  480
WNKGESQGGK INGDARHQPT AEKKRNRNIG PKSKRLLMHR EDALELRLTW EEAQDLLRPP  540
PSVKPSIVTI EDHEFEEFDE PPVFGKRTIF AHQSSGGQEQ WAQCDDCSKW RKLPEHVLLP  600
PKWTCSDNIW DSSRCLCSAP EEISPKDLDN LLRLSKDFKK RRIVGRHKPS PECEPSGLDA  660
LASAAVLGDN IGDTGEPSVG ATTKHPRHRS GCTCIVCIQP PSGKGKHNPT CTCNVCMTVK  720
RRFKTLMLRK KKRQSEEHEA EISQKDNNDH KDESEMISKL SNAVLPVSNS GNEVSQNRKQ  780
TEVAETSAGS LDLNCHPNRD EMQLDMPGLS MMNIGDPFDS YTKQNGLPNL MCDRHSSFGP  840
CLHSQTNGEY PRTLSDEAFH DSMGWNRESR GD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	720	731	KRRFKTLMLRKK
2	720	733	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein