PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642887.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 855aa MW: 93996.8 Da PI: 7.1972

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.8	4.7e-19	331	430	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e++ l+++d +gr+W++++++ +++s++yvl+ G ++ +L++gD+++F++++ +++ XP_021642887.1 331 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGVPLRIQDFKGREWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTITFSRID-PGGK 423 99************************666778999***********99899999999.*******************887.7887 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_021642887.1 424 LVMGFRK 430 8888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 855 aa Download sequence
MGSKVCMNAS CGTTTTREWK RGWRLRSGGY ACLCYTCGST YDDSVYCDTF HLEESGWREC 60 KICSKRLHCG CIASTYLLEI LDFGGVGCTS CAKISQLHSV RSIHSNEISN AFGSVTTNNA 120 VGLESTPPEN RVAGSALDEG KLAQLCRIME ANKPTLLCQS EGADTNASPG HFRQEEVIHP 180 IGEAGTGFSN ESQLSVGISR FAKPDSIRPI LEMRDMNGSL VPSLTMTLGA PSGTTSFGPY 240 PCGAVEGRGK SITPPFQQGQ RSRPILPKLP KPGSAGSSET NNAVVPELRI ARTPAEGRGK 300 NQLLPRYWPR ITDLELQQLS GDLNSNIVPL FEKVLSASDA GRIGRLVLPK ACAEAYFPPI 360 SQSEGVPLRI QDFKGREWTF QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTITFSRIDP 420 GGKLVMGFRK ATNNSDTQEA QTTALPSGTA SAETSFSADG DIGWNKGESQ GGKINGDARH 480 QPTAEKKRNR NIGPKSKRLL MHREDALELR LTWEEAQDLL RPPPSVKPSI VTIEDHEFEE 540 FDEPPVFGKR TIFAHQSSGG QEQWAQCDDC SKWRKLPEHV LLPPKWTCSD NIWDSSRCLC 600 SAPEEISPKD LDNLLRLSKD FKKRRIVGRH KPSPECEPSG LDALASAAVL GDNIGDTGEP 660 SVGATTKHPR HRSGCTCIVC IQPPSGKGKH NPTCTCNVCM TVKRRFKTLM LRKKKRQSEE 720 HEAEISQKDN NDHKDESEMI SKLSNAVLPV SNSGNEVSQN RKQTEVAETS AGSLDLNCHP 780 NRDEMQLDMP GLSMMNIGDP FDSYTKQNGL PNLMCDRHSS FGPCLHSQTN GEYPRTLSDE 840 AFHDSMGWNR ESRGD

Sequence ? help Back to Top

Protein Sequence Length: 855 aa Download sequence

MGSKVCMNAS CGTTTTREWK RGWRLRSGGY ACLCYTCGST YDDSVYCDTF HLEESGWREC  60
KICSKRLHCG CIASTYLLEI LDFGGVGCTS CAKISQLHSV RSIHSNEISN AFGSVTTNNA  120
VGLESTPPEN RVAGSALDEG KLAQLCRIME ANKPTLLCQS EGADTNASPG HFRQEEVIHP  180
IGEAGTGFSN ESQLSVGISR FAKPDSIRPI LEMRDMNGSL VPSLTMTLGA PSGTTSFGPY  240
PCGAVEGRGK SITPPFQQGQ RSRPILPKLP KPGSAGSSET NNAVVPELRI ARTPAEGRGK  300
NQLLPRYWPR ITDLELQQLS GDLNSNIVPL FEKVLSASDA GRIGRLVLPK ACAEAYFPPI  360
SQSEGVPLRI QDFKGREWTF QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTITFSRIDP  420
GGKLVMGFRK ATNNSDTQEA QTTALPSGTA SAETSFSADG DIGWNKGESQ GGKINGDARH  480
QPTAEKKRNR NIGPKSKRLL MHREDALELR LTWEEAQDLL RPPPSVKPSI VTIEDHEFEE  540
FDEPPVFGKR TIFAHQSSGG QEQWAQCDDC SKWRKLPEHV LLPPKWTCSD NIWDSSRCLC  600
SAPEEISPKD LDNLLRLSKD FKKRRIVGRH KPSPECEPSG LDALASAAVL GDNIGDTGEP  660
SVGATTKHPR HRSGCTCIVC IQPPSGKGKH NPTCTCNVCM TVKRRFKTLM LRKKKRQSEE  720
HEAEISQKDN NDHKDESEMI SKLSNAVLPV SNSGNEVSQN RKQTEVAETS AGSLDLNCHP  780
NRDEMQLDMP GLSMMNIGDP FDSYTKQNGL PNLMCDRHSS FGPCLHSQTN GEYPRTLSDE  840
AFHDSMGWNR ESRGD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	703	714	KRRFKTLMLRKK
2	703	716	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein