PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642993.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 451aa MW: 49492.6 Da PI: 5.8508

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.7e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+ ++++G g W+t +++ g+ R++k+c++rw +yl XP_021642993.1 14 KGAWTADEDQKLIAFIQEHGEGGWRTLPQKAGLQRCGKSCRLRWANYL 61 79********************************************97 PP
2	Myb_DNA-binding	56.5	6.2e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++teE+++++++++ lG++ W++Iar ++ +Rt++++k++w+++l XP_021642993.1 67 RGEFSTEEEQKIIQLHASLGNR-WSAIARNLP-KRTDNEIKNYWNTHL 112 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MGRTPGCNTD GLKKGAWTAD EDQKLIAFIQ EHGEGGWRTL PQKAGLQRCG KSCRLRWANY 60 LRPDIKRGEF STEEEQKIIQ LHASLGNRWS AIARNLPKRT DNEIKNYWNT HLKKRQAEKG 120 TALVSRKPFG PSSAPSDAIH ESSECEPAQP QPTSLRPASA SAQLLNKIAA KLAPSTCLET 180 LKTSQSLQTL STEADKEVVD VHIISNTCQS EPPPSLAVRS PDMPRPVSTS ARILNKMAGR 240 LTTHLHCLDT LKSILSGSSD NHNFMHRSPS ASSLSETASD MSRSISTSNG GINDQMPTHN 300 HLSPLIDSFD LDLLKDWNGV SDCGVSSSSL GDTYNGWESP VSPLNNNNNN NNNALTFSGC 360 ESMGTCSGEV KDAMTTETTY ESEMTFGYQD ASDQYAQYFT DGFSNFFIGD SHVVSACSGD 420 SHEGKVFEED TYSWNNGHLF ENYQPLDSHI F

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MGRTPGCNTD GLKKGAWTAD EDQKLIAFIQ EHGEGGWRTL PQKAGLQRCG KSCRLRWANY  60
LRPDIKRGEF STEEEQKIIQ LHASLGNRWS AIARNLPKRT DNEIKNYWNT HLKKRQAEKG  120
TALVSRKPFG PSSAPSDAIH ESSECEPAQP QPTSLRPASA SAQLLNKIAA KLAPSTCLET  180
LKTSQSLQTL STEADKEVVD VHIISNTCQS EPPPSLAVRS PDMPRPVSTS ARILNKMAGR  240
LTTHLHCLDT LKSILSGSSD NHNFMHRSPS ASSLSETASD MSRSISTSNG GINDQMPTHN  300
HLSPLIDSFD LDLLKDWNGV SDCGVSSSSL GDTYNGWESP VSPLNNNNNN NNNALTFSGC  360
ESMGTCSGEV KDAMTTETTY ESEMTFGYQD ASDQYAQYFT DGFSNFFIGD SHVVSACSGD  420
SHEGKVFEED TYSWNNGHLF ENYQPLDSHI F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07690.1	2e-69	MYB family protein