PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021643238.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB_related
Protein Properties Length: 310aa    MW: 34300.1 Da    PI: 10.3266
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021643238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.52.6e-125498147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_021643238.1 54 RESWTEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 98
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MVSKNPNPPD GFYLDPNGMA LPGLGPFVTA STTTSSAEDP TKKIRKPYTI TKSRESWTEP  60
EHDKFLEALQ LFDRDWKKIE AFIGSKTVIQ IRSHAQKYFL KVQKSGTNEH LPPPRPKRKA  120
AHPYPQKATK NSPVLSQPPG SFQSSSALLE PGFVRRRDTA SMPRNPIASA ATASRKNNLP  180
AVRLSNQTKV AYNCCSSTES APRTKPLGES AELGNHGHPL RVLPDFAQVY KFIGSVFDPN  240
ASGHLQKLKK MDPIDVETVL LLMRNLSINL TSPDFEDHRR LLSSYEIDTQ AIGASKTLKD  300
NVPKNVAQFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-115MYB_related family protein