PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643265.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 360aa MW: 41686.7 Da PI: 9.5188

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.6	1.1e-13	6	96	2	98
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f +l+ s++ + + l++p +f++++g++ s +l + g +W v l k ++++++ +GWkeF + +++g f+vF+++g+ f +v++f+ XP_021643265.1 6 FHKLILSNTIRDKKLRIPDNFVKKFGND--LSAFGRLSVPGGPVWPVGL--IKADDKFWFHEGWKEFMERYSIRVGYFLVFRYEGHAVF--TVHIFN 96 56677899999999*********877..777899*********..9*****************************998888..888885 PP
2	B3	58.2	1.5e-18	259	349	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 vl ps+ + ++++lp fae++ +g++ ++l+ ++g++W v++ yr+++ l++GW eF +n+L egD+++F+l+++++ l+v+vf XP_021643265.1 259 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQFSDGKQWPVRCLYRGGR--AKLSQGWYEFTLENNLGEGDVCIFELIRSRDIVLKVTVF 348 78899****************876743...59999999****665555..66***********************999999999999 PP - CS B3 98 r 98 r XP_021643265.1 349 R 349 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MPRPYFHKLI LSNTIRDKKL RIPDNFVKKF GNDLSAFGRL SVPGGPVWPV GLIKADDKFW 60 FHEGWKEFME RYSIRVGYFL VFRYEGHAVF TVHIFNLSAS EINYQSNALS GRRYLAFEEM 120 EDDDFVEYLS SSSPYLVPNS MKRNLQLSKD ASISHATNQG TRDVGVQFNA IEMKNYADDV 180 RFYIPDGEMQ KPKKRGRKKL KIDPNEQQPS ALQEEEADMR FRFYESASAR KRTVTAEERE 240 RAINAAKAFE PINPFCRVVL RPSYLYRGCI MYLPSCFAEK NLNGVSGFIK LQFSDGKQWP 300 VRCLYRGGRA KLSQGWYEFT LENNLGEGDV CIFELIRSRD IVLKVTVFRV LESAGFVNRP

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MPRPYFHKLI LSNTIRDKKL RIPDNFVKKF GNDLSAFGRL SVPGGPVWPV GLIKADDKFW  60
FHEGWKEFME RYSIRVGYFL VFRYEGHAVF TVHIFNLSAS EINYQSNALS GRRYLAFEEM  120
EDDDFVEYLS SSSPYLVPNS MKRNLQLSKD ASISHATNQG TRDVGVQFNA IEMKNYADDV  180
RFYIPDGEMQ KPKKRGRKKL KIDPNEQQPS ALQEEEADMR FRFYESASAR KRTVTAEERE  240
RAINAAKAFE PINPFCRVVL RPSYLYRGCI MYLPSCFAEK NLNGVSGFIK LQFSDGKQWP  300
VRCLYRGGRA KLSQGWYEFT LENNLGEGDV CIFELIRSRD IVLKVTVFRV LESAGFVNRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-135	B3 family protein