PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643281.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 409aa MW: 46755.4 Da PI: 8.5301

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643281.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.6	6e-15	23	112	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk+ +ps +++ l++p kf++++g + s ++ ++g W+v l +k ++++++ +GW +Fv+ ++ g f+vF + g s+f v XP_021643281.1 23 FFKIILPSTIDEKK-LRIPDKFVRKFGDE--LSDVANFMVPNGCAWKVGL--TKDQNGIWFDDGWHNFVEHYSIRNGYFLVFGYRGFSNF--SVL 110 89999999999988.*********865..7889***********..*****************************9776777..666 PP EE CS B3 96 vf 97 ++ XP_021643281.1 111 IL 112 65 PP
2	B3	60.7	2.5e-19	311	400	4	98
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 vl+++++ +++l++p +fa+++ + +k ++l+ ++gr+W v+l +k+ gr+ +++GW+ F+++n+L+ g+++vF+l++++ l++++fr XP_021643281.1 311 VLLRPYNCYNNILYVPARFAKSYLSR--FHKHIKLQVSDGREWIVRL-AWKGCGRMDFGGGWNAFCRENNLQGGEVCVFELISSNV--LKISMFR 400 5678899999***********644..6678***********.688888999*********************997443..4777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MRSRREMEPN ANHSPVERPW QHFFKIILPS TIDEKKLRIP DKFVRKFGDE LSDVANFMVP 60 NGCAWKVGLT KDQNGIWFDD GWHNFVEHYS IRNGYFLVFG YRGFSNFSVL ILDVTACEIE 120 YPQNGEGSIY GEKCLVHHQI EMENNDSIQI SGSTLLSPYC FSLKSKVCGE SVTKGESSRR 180 HNPQLQNPGR KKQHRGVASM VNPYDKHLCD TRSKKIKMEE LLEIANVDAN ESGRGKLDEH 240 TISNSHGPLV KINDSNISKV EVGDNELLAK YEEDVEIITS EMFGFKKASP ESEKAIQAAR 300 MFKPKSPSFM VLLRPYNCYN NILYVPARFA KSYLSRFHKH IKLQVSDGRE WIVRLAWKGC 360 GRMDFGGGWN AFCRENNLQG GEVCVFELIS SNVLKISMFR AVPVVRPEK

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MRSRREMEPN ANHSPVERPW QHFFKIILPS TIDEKKLRIP DKFVRKFGDE LSDVANFMVP  60
NGCAWKVGLT KDQNGIWFDD GWHNFVEHYS IRNGYFLVFG YRGFSNFSVL ILDVTACEIE  120
YPQNGEGSIY GEKCLVHHQI EMENNDSIQI SGSTLLSPYC FSLKSKVCGE SVTKGESSRR  180
HNPQLQNPGR KKQHRGVASM VNPYDKHLCD TRSKKIKMEE LLEIANVDAN ESGRGKLDEH  240
TISNSHGPLV KINDSNISKV EVGDNELLAK YEEDVEIITS EMFGFKKASP ESEKAIQAAR  300
MFKPKSPSFM VLLRPYNCYN NILYVPARFA KSYLSRFHKH IKLQVSDGRE WIVRLAWKGC  360
GRMDFGGGWN AFCRENNLQG GEVCVFELIS SNVLKISMFR AVPVVRPEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-32	B3 family protein