PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021643520.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 711aa    MW: 79296.2 Da    PI: 6.713
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021643520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.61.2e-192479156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    ++  +++t+ q+++Le++F+++++p+ ++r++L+k+lgL+ rq+k+WFqN+R++ k
  XP_021643520.1 24 KKAYHRHTSRQIQQLEAFFKECPHPDDNQRRQLSKELGLEPRQIKFWFQNKRTQTK 79
                    678899***********************************************988 PP
2START144.11.3e-452244443206
                     HHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   3 aeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv...........dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     a +a++el+++   +ep+W +s   ++g +++ + + +kv            ++e +++sg+v+m+ ++lve +ld++ +W   ++    +a+++
  XP_021643520.1 224 AARAMEELIRLLRINEPLWIRSQ--SDGRYTIHRDSYDKVfprahhfkgsnARVESSKDSGMVTMNGMNLVEMFLDTN-KWVDLFPtivtRASII 315
                     7899*******************..777777777777777888889999999**************************.99999988889***** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +v+++g      g lqlm+ ++  lsplvp R+f f+R+++q +a++wvi+dvS d  +++     + R+ +lpSg++i++++ng skvtwvehv
  XP_021643520.1 316 QVLETGlignrsGSLQLMYEQMHILSPLVPsREFCFLRQCQQIEADTWVIADVSYDCLKENGF---SSRSWRLPSGCMIQDMPNGCSKVTWVEHV 407
                     ********************************************************9999975...667777*********************** PP

                     E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     ++++++  h l+r l++s  a ga +w  tlqr ce+
  XP_021643520.1 408 EVDDKTQtHRLYRDLISSDSAYGAERWIFTLQRMCER 444
                     ****9998***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 711 aa     Download sequence    
MDFSMAAGGA SGDEQEPSNN RRGKKAYHRH TSRQIQQLEA FFKECPHPDD NQRRQLSKEL  60
GLEPRQIKFW FQNKRTQTKT QNEKADNSVL RAENERIQCE NLAIREALKN VICPSCGGPP  120
FGEEERQRSL QKLQLENAQL KEEHEKVSAL LAKYIGKPIS QMDSIIPIHR SSLDFSMTGL  180
ANQRMGSPAL DLELNPGISD HIPMPYQQLE GIPEMEKTLM TETAARAMEE LIRLLRINEP  240
LWIRSQSDGR YTIHRDSYDK VFPRAHHFKG SNARVESSKD SGMVTMNGMN LVEMFLDTNK  300
WVDLFPTIVT RASIIQVLET GLIGNRSGSL QLMYEQMHIL SPLVPSREFC FLRQCQQIEA  360
DTWVIADVSY DCLKENGFSS RSWRLPSGCM IQDMPNGCSK VTWVEHVEVD DKTQTHRLYR  420
DLISSDSAYG AERWIFTLQR MCERYAFSFG ETAPSWELGG VMTSSEGRKS IMKLAHRMVK  480
NFCSMLSMSG KLDFPQLSEV KNSGVRVSVR KSMETGQPGG MIVSAATSLW LPLLPQNVFN  540
FFKDEKTRVQ WDILSNGNPV HEIAHISGGA HPGNCISIIR PFIPSENNMV MLQESCTDPL  600
GSFIVYAPID VPTMNIAISG EDSSIIPILP SGFVISGDGR PDTGNGASTS ANPGRSSGGS  660
LLTVAFQILV STPTSSSSSK ELNIESVATV NTLISSTVQK IKAALNCSNL D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein