PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643764.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 382aa MW: 43240.1 Da PI: 7.1891

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69	5.8e-22	82	141	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ XP_021643764.1 82 SRWNPTPEQLRTLEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 141 7***************99************************************97 PP
2	Wus_type_Homeobox	115.3	3e-37	81	143	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ XP_021643764.1 81 SSRWNPTPEQLRTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 143 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MWMMGYSDGG EFNMPDSFSG RKLKPLIPRT PPVPSPNNTS NSSPPRLGRI HGNDFFSLNH 60 HLATMADQSK RDFHAQSVVV SSRWNPTPEQ LRTLEELYRR GTRTPSAEQI QHITAQLRRY 120 GKIEGKNVFY WFQNHKARER QKRRRQMESA APDHQQQNRD IEIFETKESG ASRTTYEGEQ 180 TKNWAPSTNC STLPEEAMSI QRAAKGVVAE CRGDGWIQYD EVELQHRRNF MERNDTWQMM 240 QLSCPSPTHL INASSGTCTI TTTTTTATIL AGAEATSTVV AGTIRTMDPN RQLIKTHTDL 300 NIFIAPYIEN NIGPGLINHF SNEEDHNGYG DSHQTLQLFP LRNNGGESIN DKETETSSAV 360 AAAMNANFTT PYQFFEFLPL KN

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MWMMGYSDGG EFNMPDSFSG RKLKPLIPRT PPVPSPNNTS NSSPPRLGRI HGNDFFSLNH  60
HLATMADQSK RDFHAQSVVV SSRWNPTPEQ LRTLEELYRR GTRTPSAEQI QHITAQLRRY  120
GKIEGKNVFY WFQNHKARER QKRRRQMESA APDHQQQNRD IEIFETKESG ASRTTYEGEQ  180
TKNWAPSTNC STLPEEAMSI QRAAKGVVAE CRGDGWIQYD EVELQHRRNF MERNDTWQMM  240
QLSCPSPTHL INASSGTCTI TTTTTTATIL AGAEATSTVV AGTIRTMDPN RQLIKTHTDL  300
NIFIAPYIEN NIGPGLINHF SNEEDHNGYG DSHQTLQLFP LRNNGGESIN DKETETSSAV  360
AAAMNANFTT PYQFFEFLPL KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	4e-60	WOX family protein