PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021643999.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 241aa    MW: 27527.5 Da    PI: 8.4603
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021643999.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF61.97.1e-204386649
                    HHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  6 ksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    +sn  vtfskRr gi+KKA+EL +LC+aev viifs++ k++ +
  XP_021643999.1 43 ESNLLVTFSKRRYGIFKKASELTTLCGAEVTVIIFSPSMKVFSF 86
                    68889*********************************999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MHSQSSLYLA VSDELANDVK NETAISRKST GRQKLDMVKI PRESNLLVTF SKRRYGIFKK  60
ASELTTLCGA EVTVIIFSPS MKVFSFGRPS VEAVIDRFLA GNPPQPSSCA LQLIEAHRNA  120
RVRELNMQLT QVMNQLEMEK KRGEELDKMR KVGAEQRWWE SPIEELDVPR LEELKAALEV  180
LRRNAAKLDD RLLIQCTNHP YFYNSKLETE AFPFNIRNEG FNTNMMPYNF DLGFPSGSGF  240
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-57M-type_MADS family protein