PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021644130.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB_related
Protein Properties Length: 323aa    MW: 35490.2 Da    PI: 10.1503
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021644130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-1385129147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_021644130.1  85 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 129
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MVSVNPNPAQ GFYFFDPMGM GLTGLNSLRP PMTSTNTTTT DTTIATNTTA VNTSASTTSA  60
AANTVAFADD PSKKIRKPYT ITKSRESWTE QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI  120
QIRSHAQKYF LKVQKSGTSE HVPPPRPKRK AAHPYPQKAA KNAAPVVSQV TGPFQSSSAS  180
LERGYVYRPD SSSVLGNPMT GGSLTTRGFN SLAPVNVSQV TKVMPDFAQV YSFIGSVFDP  240
NASGQLQTLK QMDPINLETV LLLMRNLSIN LTSPEFEDHR KLLASYDINT EKAKSVGPYS  300
NIVADKTQNP FSSKRSEMLK SFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-89MYB_related family protein