PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644168.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 239aa MW: 27547.5 Da PI: 6.2892

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.9e-19	39	93	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le+ Fe++ ++ +++ +L+++lgL+ rq+ +WFqNrRa++k XP_021644168.1 39 KNKRRFSDEQIRLLESIFESETKLEPRKKLQLSRELGLQPRQIAIWFQNRRARWK 93 67789*************************************************9 PP
2	HD-ZIP_I/II	119.2	2.1e-38	40	131	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq++lLE+ Fe+e+kLep++K +l+reLglqprq+a+WFqnrRAR+k+kq+E++y++L+++yd+l++ e+L++e ++L +l++ XP_021644168.1 40 NKRRFSDEQIRLLESIFESETKLEPRKKLQLSRELGLQPRQIAIWFQNRRARWKSKQIEQEYKTLRANYDKLASCFESLKNERQSLLIQLQK 131 79************************************************************************************999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MSNQIDGRGY SPEAPDERSE NFACPQLSQA PRKKKNITKN KRRFSDEQIR LLESIFESET 60 KLEPRKKLQL SRELGLQPRQ IAIWFQNRRA RWKSKQIEQE YKTLRANYDK LASCFESLKN 120 ERQSLLIQLQ KLNELLDQPC DGNMTCKGLE GSNTLIATNN GNINNDPEAQ QGLNNTEFMC 180 SQNNKSRDIE HSGDEGHELL NSDEYTDGSL ASPNQWCSFH SGSQFDLSSS SSQWFNFWT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	96	RRARWKSKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61890.1	1e-41	HD-ZIP family protein