PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021644299.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 205aa    MW: 23668.4 Da    PI: 8.2498
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021644299.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.38.4e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krie+ks r vtfskRrng++KKA ELSvLCd+e+ viifss+gklye++s
  XP_021644299.1  9 KRIEDKSSRLVTFSKRRNGLIKKARELSVLCDVEIGVIIFSSSGKLYEFCS 59
                    79***********************************************96 PP
2K-box50.77.8e-18851721299
           K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     ++ + lq ++++ k+  e Lq    +l G + e Lsl +L +Le++ + +l++ R++K+el+le+i+ l kke +l+een  L++++e
  XP_021644299.1  85 NDRKILQVDFSRFKSYAELLQIVEMQLEGPNREHLSLTDLIKLENHFDAALTQTRARKTELMLESIKVLHKKEIMLKEENGLLEREIE 172
                     5567789999***************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MGRKKVEMKR IEDKSSRLVT FSKRRNGLIK KARELSVLCD VEIGVIIFSS SGKLYEFCSN  60
GSLDKILEEY ERHLEGETAS FKGANDRKIL QVDFSRFKSY AELLQIVEMQ LEGPNREHLS  120
LTDLIKLENH FDAALTQTRA RKTELMLESI KVLHKKEIML KEENGLLERE IEAIENDVGM  180
MKRLRSPQNL HLVHASEQTT LSLLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65050.32e-46MIKC_MADS family protein