PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021644300.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 191aa    MW: 21983.4 Da    PI: 9.4507
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021644300.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.57.4e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krie+ks r vtfskRrng++KKA ELSvLCd+e+ viifss+gklye++s
  XP_021644300.1  9 KRIEDKSSRLVTFSKRRNGLIKKARELSVLCDVEIGVIIFSSSGKLYEFCS 59
                    79***********************************************96 PP
2K-box42.43e-15851631290
           K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 
                     ++ + lq ++++ k+  e Lq    +l G + e Lsl +L +Le++ + +l++ R++K+el+le+i+ l kk ++++++
  XP_021644300.1  85 NDRKILQVDFSRFKSYAELLQIVEMQLEGPNREHLSLTDLIKLENHFDAALTQTRARKTELMLESIKVLHKKIEAIEND 163
                     5567789999***************************************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MGRKKVEMKR IEDKSSRLVT FSKRRNGLIK KARELSVLCD VEIGVIIFSS SGKLYEFCSN  60
GSLDKILEEY ERHLEGETAS FKGANDRKIL QVDFSRFKSY AELLQIVEMQ LEGPNREHLS  120
LTDLIKLENH FDAALTQTRA RKTELMLESI KVLHKKIEAI ENDVGMMKRL RSPQNLHLVH  180
ASEQTTLSLL H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10140.48e-45MIKC_MADS family protein