PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644301.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 189aa MW: 21747.4 Da PI: 10.3175

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.5	7.3e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks r vtfskRrng++KKA ELSvLCd+e+ viifss+gklye++s XP_021644301.1 9 KRIEDKSSRLVTFSKRRNGLIKKARELSVLCDVEIGVIIFSSSGKLYEFCS 59 79***********************************************96 PP
2	K-box	44.7	5.7e-16	90	156	32	99
K-box 32 qreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e R+l G + e Lsl +L +Le++ + +l++ R++K+el+le+i+ l kke +l+een L++++e XP_021644301.1 90 MIE-RQLEGPNREHLSLTDLIKLENHFDAALTQTRARKTELMLESIKVLHKKEIMLKEENGLLEREIE 156 444.9************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MGRKKVEMKR IEDKSSRLVT FSKRRNGLIK KARELSVLCD VEIGVIIFSS SGKLYEFCSN 60 GSSYDSVWTR FSKNTRGILK GKLLLSKVLM IERQLEGPNR EHLSLTDLIK LENHFDAALT 120 QTRARKTELM LESIKVLHKK EIMLKEENGL LEREIEAIEN DVGMMKRLRS PQNLHLVHAS 180 EQTTLSLLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65050.2	1e-40	MIKC_MADS family protein