PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021644391.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 452aa    MW: 50762.3 Da    PI: 6.1907
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021644391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS298.22.1e-91544492373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl..fsevsPilkf 93 
                     ++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+  f++AL ar a+  + +l +a++  + +    ++++++++l  f++++P+++f
  XP_021644391.1  54 EQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALVARAAKiGTCKLLAAMANAHCTLAIDAHKFSVRELagFVDLTPWHRF 148
                     79****************************************************3333444444444443333555556666689********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.... 181
                     ++ +aN a+lea+eg + vHi+D++i++++Q p+L++a+a+R e +p +++T  g  e        ++ee+g++L +fA++ +v +ef+v+    
  XP_021644391.1 149 GFTAANAAMLEAIEGYSSVHIVDLSITHCMQIPTLIDAIANRFEVTPLIKLTIAGTTEDIppmLDLSYEELGSKLINFARSRNVIMEFRVVpssy 243
                     ****************************************************9999776688888999***********************9985 PP

            GRAS 182 ...vakrledleleeLrvkp.gEalaVnlvlqlhrll............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflea 260
                         a+ +e+l++++L   + gEal++n++++lh+++            + s +++s r+ +Lk ++sl P++vv+v++++d+ s++F+ r+ +a
  XP_021644391.1 244 adgFASLIEQLRVQHLVYTEsGEALVINCQMSLHYIPeealsciipysfEYSSCMSSLRTMFLKSLRSLDPTIVVLVDEDVDL-SNNFVCRLRSA 337
                     555555566666666655559***************************999999999**************************.889******** PP

            GRAS 261 leyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee 354
                     ++y +  +d +++ lpr s++r+++E+  + ++i+nv+a+eg +r+er e+ + W +r+++a F++++l+e+a++++k+ll +++ ++g +  ee
  XP_021644391.1 338 FNYLWIPYDIVDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGLQRVERLESRSMWVQRMRNANFRSISLGEDAVSEVKTLLGEHSaGWGLKK-EE 430
                     ****************************.********************************************************5555543.55 PP

            GRAS 355 sgslvlgWkdrpLvsvSaW 373
                     ++ lvl+Wk++++v+++aW
  XP_021644391.1 431 EDHLVLTWKGHNVVFATAW 449
                     77899************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MMQFTETPPP PLHQITAPFS NRTMNKSKTQ RTRPWPGFPT SKALGSFGDA NCMEQLLVHC  60
ANAIESNDAT LAQQILWVLN NIAPPDGDSN QRLTCAFLRA LVARAAKIGT CKLLAAMANA  120
HCTLAIDAHK FSVRELAGFV DLTPWHRFGF TAANAAMLEA IEGYSSVHIV DLSITHCMQI  180
PTLIDAIANR FEVTPLIKLT IAGTTEDIPP MLDLSYEELG SKLINFARSR NVIMEFRVVP  240
SSYADGFASL IEQLRVQHLV YTESGEALVI NCQMSLHYIP EEALSCIIPY SFEYSSCMSS  300
LRTMFLKSLR SLDPTIVVLV DEDVDLSNNF VCRLRSAFNY LWIPYDIVDT FLPRGSKQRQ  360
WYEADICWKI ENVIAHEGLQ RVERLESRSM WVQRMRNANF RSISLGEDAV SEVKTLLGEH  420
SAGWGLKKEE EDHLVLTWKG HNVVFATAWI SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-180GRAS family protein