PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644428.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 244aa MW: 26665.5 Da PI: 8.8355

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	96.8	2.2e-30	2	103	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C++ C+l+p++ p++q +++ +v+k+FG++ ++++++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++ +++++++q+ XP_021644428.1 2 SCNGCRVLRKGCSETCILRPCLqwidtPEAQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLFEACGRTVNPVNGAVGLLGTGNWHVCQA 96 6********************************************************************************************** PP DUF260 91 kaelall 97 ++e++l+ XP_021644428.1 97 AVETVLR 103 *998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MSCNGCRVLR KGCSETCILR PCLQWIDTPE AQGHATVFVA KFFGRAGLMS FISAVPESQR 60 PALFQSLLFE ACGRTVNPVN GAVGLLGTGN WHVCQAAVET VLRGGTLRPL PQLLAAGGSS 120 FPASDEASEA EVACTDMWKL QDPNPNPHSR FSNSRSKGSP KRKRTDEIKQ QQLQLQFPRR 180 VLDLQLTPIF SPKTAPRKPE IRRPETPSMN SEESVTTTTT TCLESGLGYQ YGNGGEKKLL 240 NLFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49940.1	1e-90	LBD family protein