PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644433.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 383aa MW: 42002.7 Da PI: 7.4596

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.7	4e-18	58	118	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p +ee++++ ++l ++ +++V++WFqNr+ + k+ XP_021644433.1 58 KPRWNPKPEQIRILEAIFNSgMVNPPREEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 118 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.9	3.4e-36	57	119	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P++eei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k XP_021644433.1 57 PKPRWNPKPEQIRILEAIFNSGMVNPPREEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 119 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MSSSNRHWPS MFKSKPCNTY HHRQWQHDVN PSSLVSTGCH RNPYASVPGC EERSPEPKPR 60 WNPKPEQIRI LEAIFNSGMV NPPREEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKHKL 120 RDLQNSKQQT HHTPSVTTSI TTLTATAPSS SSSSSEKSSP KGSKRTLSLS SPSVVDVSNS 180 PTCSLNQTYF QAHSELVPET FFFSAQQTAG AGGGADSFTQ GFCFSDLSNV VQVQDNTVGP 240 CTNLLLSEIM SSDASEKEVH HEDKNMKMQP HLSYPVTTPI THSISLAPSL TLPTTNPNNI 300 TVPSTISQIQ GAGESASVGS SGTVRSTVFI NDLAFEVGVG PFNLREAFGD DFVLIHSSGQ 360 PVLTNEWGVT LHPLQHGASY YLI

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MSSSNRHWPS MFKSKPCNTY HHRQWQHDVN PSSLVSTGCH RNPYASVPGC EERSPEPKPR  60
WNPKPEQIRI LEAIFNSGMV NPPREEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKHKL  120
RDLQNSKQQT HHTPSVTTSI TTLTATAPSS SSSSSEKSSP KGSKRTLSLS SPSVVDVSNS  180
PTCSLNQTYF QAHSELVPET FFFSAQQTAG AGGGADSFTQ GFCFSDLSNV VQVQDNTVGP  240
CTNLLLSEIM SSDASEKEVH HEDKNMKMQP HLSYPVTTPI THSISLAPSL TLPTTNPNNI  300
TVPSTISQIQ GAGESASVGS SGTVRSTVFI NDLAFEVGVG PFNLREAFGD DFVLIHSSGQ  360
PVLTNEWGVT LHPLQHGASY YLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	7e-76	WOX family protein