PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021644527.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 538aa    MW: 58877.9 Da    PI: 5.5256
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021644527.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS422.63.2e-1291535191374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+ L++cAe v+ g+l+la +l+++++ l  + ++g  + ++a yf +AL++r++    +++   ++ + +      +   ++ ++e++P+lkf
  XP_021644527.1 153 LVHMLMTCAESVQRGELALAASLIENMQGLltRVNTGCGIGKVAGYFINALSRRIFAPAGSISGVGSCYTYE------NEILYHHYYEACPYLKF 241
                     689*************************9977888899*******************777777666666554......4566789********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIlea+eg+++vH++Df++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+s+ +++l+e+g rLa++A++++v+f f+ ++a rled
  XP_021644527.1 242 AHFTANQAILEAFEGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSSDGRDSLREIGLRLADLARSVNVRFAFRGVAAARLED 336
                     ***************************************************************************************9999**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++L+v+p+Ea+aVn+++qlh+ll+++ + + ++d vL+ +++l+ k+++ veqeadhn++ Fl+rf+eal+yys++fdslea    +++ ++
  XP_021644527.1 337 VKPWMLQVNPKEAVAVNSIMQLHKLLASDPTRNPAIDIVLNWIRNLNLKIMTAVEQEADHNQSGFLDRFTEALYYYSTMFDSLEAC---AHHPEK 428
                     *************************************************************************************9...477778 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++ +++++rei+nvv+ceg++r+erhe l+kWr rl+ aGF+p++l+++a kqa++ll  ++s+gy+vee++g+l+lgW++rpL+++SaW+
  XP_021644527.1 429 VLAEMYIQREICNVVSCEGSARVERHEPLAKWRTRLTGAGFRPLHLGSNAFKQASMLLTLFSSEGYSVEENEGCLTLGWHSRPLIAASAWQ 519
                     888899************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    
MVPYDSDGLA GSAPSSSSSI TKPPQIDGLL AGAGYKVPSS ELRHVAQRLE RLETAMLNSP  60
SHQLSLLASD AVLYNPSDLS TWVDSLLSEL NQSQPLPSLP SDLSDLVPNS TALDSSWGME  120
HSLSQQQNQN ISQHQQNQLM VVTALEEDSA IRLVHMLMTC AESVQRGELA LAASLIENMQ  180
GLLTRVNTGC GIGKVAGYFI NALSRRIFAP AGSISGVGSC YTYENEILYH HYYEACPYLK  240
FAHFTANQAI LEAFEGHDCV HVVDFNLMHG LQWPALIQAL ALRPGGPPLL RLTGIGPPSS  300
DGRDSLREIG LRLADLARSV NVRFAFRGVA AARLEDVKPW MLQVNPKEAV AVNSIMQLHK  360
LLASDPTRNP AIDIVLNWIR NLNLKIMTAV EQEADHNQSG FLDRFTEALY YYSTMFDSLE  420
ACAHHPEKVL AEMYIQREIC NVVSCEGSAR VERHEPLAKW RTRLTGAGFR PLHLGSNAFK  480
QASMLLTLFS SEGYSVEENE GCLTLGWHSR PLIAASAWQA VPDGEPALGV IDNNGVVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-116GRAS family protein