PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644824.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 337aa MW: 38437.7 Da PI: 5.2485

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.8e-17	89	136	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l ++v+ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_021644824.1 89 KGPWTVEEDAILTEYVAIHGEGRWNAAARCAGLKRTGKSCRLRWLNYL 136 79********************************************97 PP
2	Myb_DNA-binding	48.3	2.3e-15	142	185	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_021644824.1 142 RGNITLQEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 185 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MVVLFSLLVD VFNSPLTIYT YKLLIICPSL TPTPHLLYLP SQICNSHSHL SLSLSLGLCL 60 LILIEEMGAQ VRNYDCATYK NEEDTDMRKG PWTVEEDAIL TEYVAIHGEG RWNAAARCAG 120 LKRTGKSCRL RWLNYLRPDV RRGNITLQEQ LLILELHSRW GNRWSKIAQY LPGRTDNEIK 180 NYWRTRVQKQ AKQLKCDVNS KQFRDAMRYI WMPRLVERIR AATGSSAGQS TAYSSCSSNH 240 NDIPANSEAA QINDAMMEWV MPEPSGNSLE SLDTQVSPVS DVTEYQNPTS MQNGLGLYPE 300 DESDRWAEME MQMQSSILGG GEALESLWNE ENIWFLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	1e-76	MYB family protein