PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644866.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 575aa MW: 65595.7 Da PI: 6.6192

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644866.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.6	9.1e-30	124	209	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_021644866.1 124 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 209 8***********************************999*************************98..55667*****85 PP
2	trihelix	63.4	5.3e-20	419	502	2	83
trihelix 2 WtkqevlaLiearremeerlrrg.k.lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 Wt+ e L+++r++me+r++++ + +++lWeev++km+ g+ers+ +Ckekw+++n+ +k+keg++k+++e+s+ yf+ XP_021644866.1 419 WTEAEFTRLMQLRSNMESRFQQSgClEEEALWEEVAAKMACVGYERSSLMCKEKWDSINNHTRKTKEGNNKKRKENSRGSCYFQ 502 *******************852546799****************************************999998888886 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MEMEDHNHHN QYSIDLRQFI SGRPTHFPAI PQPQPAERFS AAHRNLPPQG HHYDMMMLMP 60 RVAGLHEFHS DSTTAACVPP PAATAVVTTA NSANNTVAAA SATPTLSGLE AEAGSFGGDA 120 GTGRWPRQET LTLLEIRSRL DSKFKEANQK GPLWDEVSRI MSEEHGYQRS GKKCREKFEN 180 LYKYYKKTKE GKAGRQDGKH YRFFRQLEAL YGETSNPASV PETQFIGNNL RFHTVASTST 240 QANQEIFHSQ KFCDSLSLSN SSEFDTSSSE DNDLSTATLV ENDSTEKRRK RRDGKNWKAK 300 IKDFIDSQMM KLIERQEAWL EKLTKTLEQK EQERIFREEE WRKQEAARID REHKFWAKER 360 AWIEARDAAL MEALRRLTGR EANASSPEEL IRAEIRNQSE NGIENRSETA HNSLKCDSWT 420 EAEFTRLMQL RSNMESRFQQ SGCLEEEALW EEVAAKMACV GYERSSLMCK EKWDSINNHT 480 RKTKEGNNKK RKENSRGSCY FQSNESMYNP GGAYCEINEQ EPETVRLQAN EGSSPANSNA 540 GNAVSDSCFR FLMGDGGENL WENYGLKLSK GDQNQ

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MEMEDHNHHN QYSIDLRQFI SGRPTHFPAI PQPQPAERFS AAHRNLPPQG HHYDMMMLMP  60
RVAGLHEFHS DSTTAACVPP PAATAVVTTA NSANNTVAAA SATPTLSGLE AEAGSFGGDA  120
GTGRWPRQET LTLLEIRSRL DSKFKEANQK GPLWDEVSRI MSEEHGYQRS GKKCREKFEN  180
LYKYYKKTKE GKAGRQDGKH YRFFRQLEAL YGETSNPASV PETQFIGNNL RFHTVASTST  240
QANQEIFHSQ KFCDSLSLSN SSEFDTSSSE DNDLSTATLV ENDSTEKRRK RRDGKNWKAK  300
IKDFIDSQMM KLIERQEAWL EKLTKTLEQK EQERIFREEE WRKQEAARID REHKFWAKER  360
AWIEARDAAL MEALRRLTGR EANASSPEEL IRAEIRNQSE NGIENRSETA HNSLKCDSWT  420
EAEFTRLMQL RSNMESRFQQ SGCLEEEALW EEVAAKMACV GYERSSLMCK EKWDSINNHT  480
RKTKEGNNKK RKENSRGSCY FQSNESMYNP GGAYCEINEQ EPETVRLQAN EGSSPANSNA  540
GNAVSDSCFR FLMGDGGENL WENYGLKLSK GDQNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-140	Trihelix family protein