PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021644878.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 450aa    MW: 50766.8 Da    PI: 6.1081
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021644878.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS474.36.3e-145264471374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA++v++g+le+a+ +L ++s+las dgd+mqR+aayfteALa+r+ +s +++y+al++++ +   +see+ ++klf+e+ P+lk+++
  XP_021644878.1  26 LIHLLLTCANHVAAGNLENAEIALGQISQLASADGDTMQRIAAYFTEALAHRVIKSLPGVYRALNATKIT--LVSEEILVRKLFFEMLPFLKVAF 118
                     689*************************************************************999998..7********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI ea+ege++vHiiD+d+ +++QW+aLlqaL++Rpegpp+lRiTg+++    +ke l +++++L + Ae+l++pf+fn+ ++++le+l+
  XP_021644878.1 119 VLTNQAIIEAMEGEKMVHIIDLDAAEPAQWLALLQALSARPEGPPHLRITGIHQ----QKEVLDQMAHKLIEEAERLDIPFQFNP-IVSKLENLD 208
                     ******************************************************....9**************************.7999***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll.........................................................desvsleserdevL 228
                     +e+Lrvk+gEala+++vlqlh +l                                                         ++++s+  + d +L
  XP_021644878.1 209 IEKLRVKTGEALAICSVLQLHPFLasddelrkrspvplknsngihllrvlqmnqgtfgellekdmvngyspspdstsssplSSTASV--KMDYFL 301
                     ***************************************************************************987654333333..4699** PP

            GRAS 229 klvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaG 323
                     ++++slsPk++vv+eq+++hn+++++er+leal+ y+alfd+le++++r+s er k+E++l+g+ei+n+vacegaer+erhe+lekW +rl+ aG
  XP_021644878.1 302 NMLWSLSPKLMVVMEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSMERLKMEKMLFGEEIKNIVACEGAERKERHEKLEKWIQRLDLAG 396
                     *********************************************************************************************** PP

            GRAS 324 FkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     F+ v+ls++ + qa++ll+ ++ dgyr++ee+g +v++W+drpL+svSaWr
  XP_021644878.1 397 FGLVHLSYYGMLQARRLLQGYGCDGYRIKEENGYVVICWQDRPLFSVSAWR 447
                     **************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MSLSTGIESP YPWLGELKSE ERGLYLIHLL LTCANHVAAG NLENAEIALG QISQLASADG  60
DTMQRIAAYF TEALAHRVIK SLPGVYRALN ATKITLVSEE ILVRKLFFEM LPFLKVAFVL  120
TNQAIIEAME GEKMVHIIDL DAAEPAQWLA LLQALSARPE GPPHLRITGI HQQKEVLDQM  180
AHKLIEEAER LDIPFQFNPI VSKLENLDIE KLRVKTGEAL AICSVLQLHP FLASDDELRK  240
RSPVPLKNSN GIHLLRVLQM NQGTFGELLE KDMVNGYSPS PDSTSSSPLS STASVKMDYF  300
LNMLWSLSPK LMVVMEQDSN HNGSTLMERL LEALYSYAAL FDCLESTVSR TSMERLKMEK  360
MLFGEEIKNI VACEGAERKE RHEKLEKWIQ RLDLAGFGLV HLSYYGMLQA RRLLQGYGCD  420
GYRIKEENGY VVICWQDRPL FSVSAWRCRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein